RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 IL2RGP31785 369 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 RAD52P43351 418 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 RPL14P50914 215 aaKnown RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 P2RY4P51582 365 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 KLF3P57682 345 aaPredicted RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 RAB1AP62820 205 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TUBA1BP68363 451 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TUBA4AP68366 448 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 FUT5Q11128 374 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TRIP10Q15642 601 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 PDCD2Q16342 344 aaPredicted RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 SYPL1Q16563 259 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 HFEQ30201 348 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 NRN1LQ496H8 165 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 DCAF12L2Q5VW00 463 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 FAM91A1Q658Y4 838 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 C6orf89Q6UWU4 347 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 ZNF813Q6ZN06 617 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 MSANTD1Q6ZTZ1 278 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TUBA1AQ71U36 451 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 H1FNTQ75WM6 255 aaPredicted RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 PIWIL3Q7Z3Z3 882 aaKnown RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 MDP1Q86V88 176 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 KRT73Q86Y46 540 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 UEVLDQ8IX04 471 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 CDK20Q8IZL9 346 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 LRRC17Q8N6Y2 441 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 ANKFN1Q8N957 763 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 SCAIQ8N9R8 606 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 SYT14Q8NB59 555 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 BHLHE22Q8NFJ8 381 aaPredicted RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 TCP10LQ8TDR4 215 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 C11orf40Q8WZ69 217 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 SLC25A36Q96CQ1 311 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 ATP6V1G3Q96LB4 118 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 SPATA5L1Q9BVQ7 753 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 ASPNQ9BXN1 380 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 MRPL37Q9BZE1 423 aaKnown RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 BCL2L14Q9BZR8 327 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 EGLN1Q9GZT9 426 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 NELFAQ9H3P2 528 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TPK1Q9H3S4 243 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 ZNF665Q9H7R5 613 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 RMND5AQ9H871 391 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 AKTIPQ9H8T0 292 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TMBIM4Q9HC24 238 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 CGGBP1Q9UFW8 167 aaPredicted RBP5.41□□□□□ -1.54
CUX1-220ENST00000607092 DUSP13Q9UII6 198 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 DYSFO75923 2080 aa5.41□□□□□ -1.54
CUX1-220ENST00000607092 A0A1B0GUS0 222 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 TLDC2A0PJX2 215 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRAMEF27A3QJZ7 478 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRORSD1PA6NEY8 169 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 C17orf100A8MU93 164 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 C5orf58C9J3I9 102 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 FTCDNL1E5RQL4 147 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 TPD52L2O43399 206 aaKnown RBP5.4□□□□□ -1.54
CUX1-220ENST00000607092 BCAS1O75363 584 aaPredicted RBP5.4□□□□□ -1.54
CUX1-220ENST00000607092 FOXH1O75593 365 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 MPZL1O95297 269 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 HPXP02790 462 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 SHBGP04278 402 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 SERPINA5P05154 406 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ZCCHC18P0CG32 403 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ZNF35P13682 527 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 IDO1P14902 403 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ZNF14P17017 642 aaPredicted RBP5.4□□□□□ -1.54
CUX1-220ENST00000607092 DRD4P21917 467 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 CPT2P23786 658 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 LIPAP38571 399 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ACAA2P42765 397 aaKnown RBP5.4□□□□□ -1.54
CUX1-220ENST00000607092 CRATP43155 626 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 CRYBB2P43320 205 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 NCALDP61601 193 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 LMO4P61968 165 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRR20EP86478 221 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRR20CP86479 221 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRR20DP86480 221 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRR20BP86481 221 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PRR20AP86496 221 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PLAURQ03405 335 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 PLP2Q04941 152 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 FXNQ16595 210 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 AWAT1Q58HT5 328 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ZMAT1Q5H9K5 638 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 SPANXN4Q5MJ08 99 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ELFN2Q5R3F8 820 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 CEP85LQ5SZL2 805 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ATG16L1Q676U5 607 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 RGS7BPQ6MZT1 257 aaPredicted RBP5.4□□□□□ -1.54
CUX1-220ENST00000607092 ULK3Q6PHR2 472 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 ZNF836Q6ZNA1 936 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 HDDC2Q7Z4H3 204 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 C20orf196Q8IYI0 205 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 TMEM123Q8N131 208 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 CLEC4FQ8N1N0 589 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 LSMEM1Q8N8F7 131 aa5.4□□□□□ -1.54
CUX1-220ENST00000607092 OR6N1Q8NGY5 312 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms