RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 ERVK-25P63136 954 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 TMEM183BQ1AE95 376 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 RFX4Q33E94 735 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 PIGGQ5H8A4 983 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 TSPO2Q5TGU0 170 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF691Q5VV52 312 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 CNIH2Q6PI25 160 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 LYPD2Q6UXB3 125 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 LRRC31Q6UY01 552 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 FAM43BQ6ZT52 329 aaPredicted RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 LINC00173Q6ZV60 143 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 PSTKQ8IV42 348 aaKnown RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 TMEM183AQ8IXX5 376 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 PUSL1Q8N0Z8 303 aaKnown RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF557Q8N988 423 aaPredicted RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 OR4F6Q8NGB9 312 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF596Q8TC21 504 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 MCOLN3Q8TDD5 553 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 ASB9Q96DX5 294 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 AURKBQ96GD4 344 aaPredicted RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 SORT1Q99523 831 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 PLA2G2FQ9BZM2 168 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 SLCO1B3Q9NPD5 702 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 NUFIP1Q9UHK0 495 aaKnown RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF223Q9UK11 482 aaPredicted RBP2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 PEX16Q9Y5Y5 336 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 NPTNQ9Y639 398 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
RNU6-88P-201ENST00000606801 IGLV3-16A0A075B6K0 115 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 ARHGEF35A5YM69 484 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 CCDC182A6NF36 153 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 PCP4L1A6NKN8 68 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 ADRB3P13945 408 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 KITLGP21583 273 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 CXCL5P42830 114 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 GYG1P46976 350 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 PAX5Q02548 391 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 MRPL28Q13084 256 aaKnown RBP2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 AQP6Q13520 282 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 EBI3Q14213 229 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 CTSL3PQ5NE16 218 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 PHYHD1Q5SRE7 291 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 KHDRBS2Q5VWX1 349 aaKnown RBP2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 UTS2BQ765I0 119 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 Q8N976 141 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 OR1N2Q8NGR9 330 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 TUBGCP3Q96CW5 907 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 CEP170P1Q96L14 293 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 RARRES2Q99969 163 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 TMEM59Q9BXS4 323 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 MFFQ9GZY8 342 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 TPK1Q9H3S4 243 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF226Q9NYT6 803 aa2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 PACSIN2Q9UNF0 486 aaPredicted RBP2.35□□□□□ -2.03
RNU6-88P-201ENST00000606801 GOLGA8SH3BPF8 625 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CCL21O00585 134 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 TMEM50AO95807 157 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CSF3P09919 207 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 HPGDP15428 266 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 ZNF30P17039 623 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 TCN1P20061 433 aaPredicted RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 MX1P20591 662 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 PTMSP20962 102 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CNR1P21554 472 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 SLC26A3P40879 764 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 RFX3P48380 749 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 TPMTP51580 245 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 SUCLG1P53597 346 aaKnown RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CDH4P55283 916 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 FBXW4P57775 412 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 RPL23AP62750 156 aaKnown RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 RPS21P63220 83 aaKnown RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 LRRC63Q05C16 580 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 TFDP3Q5H9I0 405 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 ASCL5Q7RTU5 278 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CAMK2N1Q7Z7J9 78 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 LHFPL3Q86UP9 236 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 EGFL6Q8IUX8 553 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 C12orf56Q8IXR9 622 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 HSD17B11Q8NBQ5 300 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 SGK3Q96BR1 496 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 DNAJC19Q96DA6 116 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 MED8Q96G25 268 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 WFIKKN1Q96NZ8 548 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 RIOK1Q9BRS2 568 aaKnown RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 SLC39A3Q9BRY0 314 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 SLC17A9Q9BYT1 436 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 GCOM2Q9BZD3 368 aaPredicted RBP2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 NT5MQ9NPB1 228 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CTPS2Q9NRF8 586 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 EXD2Q9NVH0 621 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 CTNNA3Q9UI47 895 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 TBX21Q9UL17 535 aa2.34□□□□□ -2.03
RNU6-88P-201ENST00000606801 DENND4AQ7Z401 1863 aa2.33□□□□□ -2.04
RNU6-88P-201ENST00000606801 KIF26AQ9ULI4 1882 aaPredicted RBP2.33□□□□□ -2.04
RNU6-88P-201ENST00000606801 IGLV4-69A0A075B6H9 119 aa2.33□□□□□ -2.04
RNU6-88P-201ENST00000606801 FAM240BA0A1B0GVZ2 78 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms