RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ERVS71-1P61550 626 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 UFM1P61960 85 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 OGDHQ02218 1023 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CNTN1Q12860 1018 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GOLGA7BQ2TAP0 167 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 WIPI1Q5MNZ9 446 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CLEC6AQ6EIG7 209 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM199XQ6PEV8 388 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SLC16A14Q7RTX9 510 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM58AQ8N1B3 248 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FBXL13Q8NEE6 735 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CD99L2Q8TCZ2 262 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ACER1Q8TDN7 264 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MRGPRDQ8TDS7 321 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CRYGNQ8WXF5 182 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 NRGNQ92686 78 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CMTM7Q96FZ5 175 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TCTN2Q96GX1 697 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 LCORQ96JN0 433 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FAM210BQ96KR6 192 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CPNE1Q99829 537 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TLNRD1Q9H1K6 362 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CSNK1G1Q9HCP0 422 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GPR83Q9NYM4 423 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PLEKHB1Q9UF11 243 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GNG8Q9UK08 70 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ACSL6Q9UKU0 697 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SLC27A6Q9Y2P4 619 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CFAP20Q9Y6A4 193 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 J3KTA2 159 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF561-AS1K7EIQ3 104 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TP53I11O14683 189 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TGOLN2O43493 480 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SIX3O95343 332 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TRBC1P01850 177 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TCRBP04435 133 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ANXA4P09525 319 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FSTP19883 344 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FPR1P21462 350 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PSMA1P25786 263 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GLRBP48167 497 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 LGALS4P56470 323 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 PRR5P85299 388 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RBM39Q14498 530 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ELAVL3Q14576 367 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 MELKQ14680 651 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 NKG7Q16617 165 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 C5orf64Q2M2E5 130 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ASPRV1Q53RT3 343 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TMEM255AQ5JRV8 349 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SPATA46Q5T0L3 261 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 C10orf91Q5T1B1 145 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ABLIM2Q6H8Q1 611 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RGMBQ6NW40 437 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ULK3Q6PHR2 472 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 B3GLCTQ6Y288 498 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SIGLEC15Q6ZMC9 328 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 OVCH1Q7RTY7 1134 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 CPXM2Q8N436 756 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 GPR26Q8NDV2 337 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 DNAAF1Q8NEP3 725 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 EXTL1Q92935 676 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF354BQ96LW1 612 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RNF157Q96PX1 679 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 OR5B2Q96R09 309 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TIMM29Q9BSF4 260 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF2Q9BSG1 426 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 SPATC1LQ9H0A9 340 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 FKRPQ9H9S5 495 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 BEX1Q9HBH7 125 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 BARX1Q9HBU1 254 aaPredicted RBP4.32□□□□□ -1.72
LINC01109-201ENST00000603837 NANSQ9NR45 359 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 DMAC2Q9NW81 257 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 RASL12Q9NYN1 266 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 TAS2R16Q9NYV7 291 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 HACL1Q9UJ83 578 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 DKKL1Q9UK85 242 aa4.32□□□□□ -1.72
LINC01109-201ENST00000603837 NPIPA5A0A0B4J1W7 369 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 HYKKA2RU49 373 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 C3orf70A6NLC5 250 aaPredicted RBP4.31□□□□□ -1.72
LINC01109-201ENST00000603837 IFITM10A6NMD0 228 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ZNF726A6NNF4 738 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NPIPA5E9PKD4 350 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 NPIPA3F8WFD2 350 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RAB27BO00194 218 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 P2RY10O00398 339 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 PHOX2AO14813 284 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 IFNA17P01571 189 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 RLN1P04808 185 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ANXA5P08758 320 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 MMP9P14780 707 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 EGR1P18146 543 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 GGT1P19440 569 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 S1PR1P21453 382 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 ACP1P24666 158 aa4.31□□□□□ -1.72
LINC01109-201ENST00000603837 SHC1P29353 583 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms