RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 IDH3GP51553 393 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 ARFIP2P53365 341 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 HGFACQ04756 655 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 PMS2P3Q13401 168 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 EFNB3Q15768 340 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 VMACQ2NL98 169 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 RABL3Q5HYI8 236 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 INTS11Q5TA45 600 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 CARD17Q5XLA6 110 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 NANOGP8Q6NSW7 305 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 MYPOPQ86VE0 399 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 SLC26A7Q8TE54 656 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 NANOGQ9H9S0 305 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 MYOZ1Q9NP98 299 aaPredicted RBP18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 ZNF446Q9NWS9 450 aa18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 MRPL39Q9NYK5 338 aaKnown RBP18.38■□□□□ 0.53
PPFIA3-209ENST00000602783 LOC100289279A0A1B0GTE1 492 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 VSTM5A8MXK1 200 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 FXYD1O00168 92 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 SEC14L2O76054 403 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 THY1P04216 161 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 APEHP13798 732 aaKnown RBP18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 THBS4P35443 961 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 CRYBA2P53672 197 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 PUDPQ08623 228 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 NPRL3Q12980 569 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 KLF10Q13118 480 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 CYLC2Q14093 348 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 IQCCQ4KMZ1 466 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 PHYHD1Q5SRE7 291 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 REP15Q6BDI9 236 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 FAM166AQ6J272 317 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 LINC00114Q6XXX2 140 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 WDR88Q6ZMY6 472 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 TSPYL5Q86VY4 417 aaPredicted RBP18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 NUP37Q8NFH4 326 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 ADAMTS16Q8TE57 1224 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 EMC6Q9BV81 110 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 RAB1BQ9H0U4 201 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 MRGBPQ9NV56 204 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 MED29Q9NX70 200 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 KCNS2Q9ULS6 477 aa18.37■□□□□ 0.53
PPFIA3-209ENST00000602783 IGHV4-61A0A0C4DH41 118 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 ZNF503-AS2A6NEH8 195 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 M0R3G1 203 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 MRASO14807 208 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 LYPD3O95274 346 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 ARR3P36575 388 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 CAPZA2P47755 286 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 PPOXP50336 477 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 MMEL1Q495T6 779 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 COQ5Q5HYK3 327 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 CCDC80Q76M96 950 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 WDFY1Q8IWB7 410 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 LRRC58Q96CX6 371 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 MSI2Q96DH6 328 aaKnown RBP18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 CHODLQ9H9P2 273 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 SAR1AQ9NR31 198 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 NOX1Q9Y5S8 564 aa18.36■□□□□ 0.53
PPFIA3-209ENST00000602783 IGHV2OR16-5A0A0B4J2B6 119 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SLC35F4A4IF30 521 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 TRAPPC13A5PLN9 417 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 BBIP1A8MTZ0 92 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 hCG_2039718K7EN88 272 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 PLPP3O14495 311 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SERPINI2O75830 405 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 MT-ATP6P00846 226 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 VIMP08670 466 aaKnown RBP18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 NPR2P20594 1047 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 IGFBP5P24593 272 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 MAPRE2Q15555 327 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SPATA21Q7Z572 469 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 MDP1Q86V88 176 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SNX32Q86XE0 403 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 CALHM3Q86XJ0 350 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 CCDC36Q8IYA8 594 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 C20orf196Q8IYI0 205 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 OR8J3Q8NGG0 315 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 OR5J2Q8NH18 312 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 RASSF5Q8WWW0 418 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 TXNDC15Q96J42 360 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SH3GL1Q99961 368 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 BPESC1Q9GZL8 116 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 PCDHAC1Q9H158 963 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 ZNF442Q9H7R0 627 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 FBXO9Q9UK97 447 aaPredicted RBP18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SLC7A7Q9UM01 511 aa18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.35■□□□□ 0.53
PPFIA3-209ENST00000602783 SH3PXD2BA1X283 911 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 ZNF99A8MXY4 864 aaPredicted RBP18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 C11orf98E9PRG8 122 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 KPNA4O00629 521 aaPredicted RBP18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 AHCYP23526 432 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 GUCY1A3Q02108 690 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 CAMK2DQ13557 499 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 TTC33Q6PID6 262 aaPredicted RBP18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 NHLRC1Q6VVB1 395 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 IL17RELQ6ZVW7 336 aa18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 ZCCHC24Q8N2G6 241 aaKnown RBP18.34■□□□□ 0.53
PPFIA3-209ENST00000602783 SVOPLQ8N434 492 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms