RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 DGCR6Q14129 220 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 CEACAM16Q2WEN9 425 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 TBRG1Q3YBR2 411 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 FGD3Q5JSP0 725 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 PHYHD1Q5SRE7 291 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 TMEM108Q6UXF1 575 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 C20orf204Q6ZNR8 217 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 WDFY1Q8IWB7 410 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 MOSPD2Q8NHP6 518 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 MAGEE2Q8TD90 523 aaPredicted RBP14.76□□□□□ -0.05
TRIM28-215ENST00000601150 MBD6Q96DN6 1003 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 PIP5K1AQ99755 562 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 INIPQ9NRY2 104 aa14.76□□□□□ -0.05
TRIM28-215ENST00000601150 OTOGQ6ZRI0 2925 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 EFCAB9A8MZ26 197 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 HS3ST1O14792 307 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 PDE5AO76074 875 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 UBOX5O94941 541 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 DIRAS1O95057 198 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 BCL10O95999 233 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 F13BP05160 661 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 HOXB1P14653 301 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 CD53P19397 219 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 MAKP20794 623 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 ATP6V1B2P21281 511 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 PTAFRP25105 342 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 CSNK1A1P48729 337 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 DAP3P51398 398 aaKnown RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 SMIM11AP58511 58 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 UBE2NP61088 152 aaKnown RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 TRIM25Q14258 630 aaKnown RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 MELKQ14680 651 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 IQCCQ4KMZ1 466 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 MTX3Q5HYI7 312 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 ADAM5Q6NVV9 412 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 PODNL1Q6PEZ8 512 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 TBPL2Q6SJ96 375 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 CYP2R1Q6VVX0 501 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 HDDC2Q7Z4H3 204 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 SLC7A13Q8TCU3 470 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 AKAP1Q92667 903 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF566Q969W8 418 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF837Q96EG3 531 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 SLC25A44Q96H78 314 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 DHRS1Q96LJ7 313 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 C1QTNF6Q9BXI9 259 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 ULBP2Q9BZM5 246 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 TMEM5Q9Y2B1 443 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 HIF3AQ9Y2N7 669 aa14.75□□□□□ -0.05
TRIM28-215ENST00000601150 HEATR1Q9H583 2144 aaKnown RBP14.75□□□□□ -0.05
TRIM28-215ENST00000601150 A0A096LPE4 126 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ARPC4-TTLL3A0A0A6YYG9 625 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 A0A1W2PPZ6 126 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF99A8MXY4 864 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-215ENST00000601150 MCIDASD6RGH6 385 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 M0R1B8 84 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 FABP3P05413 133 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 PAX7P23759 505 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 SLC9A3P48764 834 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ART1P52961 327 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 RPS4XP62701 263 aaKnown RBP14.74□□□□□ -0.05
TRIM28-215ENST00000601150 LAPTM4AQ15012 233 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ANKDD1AQ495B1 522 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ALG10Q5BKT4 473 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 TMPRSS11FQ6ZWK6 438 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 OAFQ86UD1 273 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 DHFR2Q86XF0 187 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 MEX3DQ86XN8 651 aaKnown RBP14.74□□□□□ -0.05
TRIM28-215ENST00000601150 ASB10Q8WXI3 467 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 TMEM54Q969K7 222 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 RADILQ96JH8 1075 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 FOXC2Q99958 501 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 NELFAQ9H3P2 528 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 IL1RAPQ9NPH3 570 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 GLTPQ9NZD2 209 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 MGAT4BQ9UQ53 548 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 POFUT2Q9Y2G5 429 aa14.74□□□□□ -0.05
TRIM28-215ENST00000601150 CSMD1Q96PZ7 3565 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 CADP27708 2225 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 TRBV4-1A0A0J9YWV2 114 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 NPIPB13A6NJU9 1138 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 NPIPB4C9JG80 1138 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 ABCD4O14678 606 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 IGHG1P01857 330 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 PGA4P0DJD7 388 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 PGA3P0DJD8 388 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 CD40P25942 277 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 GPR4P46093 362 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 SPIBQ01892 262 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 DEFB113Q30KQ7 82 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 DNAL1Q4LDG9 190 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 LCN8Q6JVE9 175 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF611Q8N823 705 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 KBTBD8Q8NFY9 601 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 OR13C2Q8NGS9 318 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 OR51A7Q8NH64 312 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 LILRB1Q8NHL6 650 aaPredicted RBP14.73□□□□□ -0.05
TRIM28-215ENST00000601150 PIGTQ969N2 578 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 ZNF347Q96SE7 839 aa14.73□□□□□ -0.05
TRIM28-215ENST00000601150 CCL19Q99731 98 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms