RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SLA2Q9H6Q3 261 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 KLHL21Q9UJP4 597 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 MRTO4Q9UKD2 239 aaKnown RBP10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 PCDHGB7Q9Y5F8 929 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 MEIS3P1A6NDR6 274 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 H0YIG0 161 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 DHFRP00374 187 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 RENP00797 406 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 GLULP15104 373 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 GIFP27352 417 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 ABCD3P28288 659 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 ARRB1P49407 418 aaPredicted RBP10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 EGR4Q05215 589 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 POU4F2Q12837 409 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 DMKNQ6E0U4 476 aaPredicted RBP10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 LRRC28Q86X40 367 aaPredicted RBP10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 NRIP3Q9NQ35 241 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 PRDM6Q9NQX0 595 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 SLC23A1Q9UHI7 598 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 ST6GALNAC2Q9UJ37 374 aa10.48□□□□□ -0.73
ARHGEF1-220ENST00000600274 HRGP04196 525 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 PNMTP11086 282 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 ARSBP15848 533 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 EBPQ15125 230 aaKnown RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 EXOSC6Q5RKV6 272 aaKnown RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR6V1Q8N148 313 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 NPAS1Q99742 590 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF426Q9BUY5 554 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 KCNG2Q9UJ96 466 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 PCNX3Q9H6A9 2034 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF780AO75290 641 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 AKR7A3O95154 331 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 IL33O95760 270 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 DDAH2O95865 285 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 HEXBP07686 556 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 CXCL12P48061 93 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 GABRA4P48169 554 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR7E24Q6IFN5 339 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 GUSBP11Q6P575 273 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 MDGA2Q7Z553 956 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 ATG4DQ86TL0 474 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 PIAS4Q8N2W9 510 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 GALNT6Q8NCL4 622 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 OR51A4Q8NGJ6 313 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 C1orf216Q8TAB5 229 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 STT3BQ8TCJ2 826 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 INPP5EQ9NRR6 644 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 MED11Q9P086 117 aa10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 TNRC18O15417 2968 aaPredicted RBP10.47□□□□□ -0.73
ARHGEF1-220ENST00000600274 POM121CA8CG34 1229 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 GLCEO94923 617 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 TIAF1O95411 115 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 SERPINA3P01011 423 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 IGLV3-19P01714 112 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 IL11P20809 199 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 ELAVL1Q15717 326 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 MESTQ5EB52 335 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 ADAMTS18Q8TE60 1221 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 HLA-CQ95604 372 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 KCNK15Q9H427 330 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 CENPMQ9NSP4 180 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 KLRF1Q9NZS2 232 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 FREM3P0C091 2139 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 ANXA2P2A6NMY6 339 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 SUSD5O60279 629 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 KHDRBS3O75525 346 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 MPZL1O95297 269 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 CLPSP04118 112 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 ANXA2P07355 339 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 EPXP11678 715 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 SRMP19623 302 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 AGFG1P52594 562 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 METAP1DQ6UB28 335 aaPredicted RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 SIAH3Q8IW03 269 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 FAM109AQ8N4B1 249 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 POMGNT2Q8NAT1 580 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 SLC38A9Q8NBW4 561 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 ZNF721Q8TF20 911 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.731e-11■■■■□ 22.3
ARHGEF1-220ENST00000600274 AMELYQ99218 206 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 EMC6Q9BV81 110 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 C1QTNF6Q9BXI9 259 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 WWTR1Q9GZV5 400 aa10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 MRPL39Q9NYK5 338 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 CDV3Q9UKY7 258 aaKnown RBP10.46□□□□□ -0.73
ARHGEF1-220ENST00000600274 A0A1B0GX78 115 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 RGS13O14921 159 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 CCKBRP32239 447 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 ACSM1Q08AH1 577 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 SF3A2Q15428 464 aaKnown RBP10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 TMPRSS9Q7Z410 1059 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 LINC00346Q8IVM7 164 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR5AK2Q8NH90 309 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 OR14A16Q8NHC5 309 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 ACOT12Q8WYK0 555 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 DUSP15Q9H1R2 295 aaPredicted RBP10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 APMAPQ9HDC9 416 aa10.46□□□□□ -0.74
ARHGEF1-220ENST00000600274 CYSLTR2Q9NS75 346 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms