RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 SLC9B1Q4ZJI4 515 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 C6orf10Q5SRN2 563 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 FAM69AQ5T7M9 428 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 GKAP1Q5VSY0 366 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 OGFOD2Q6N063 350 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC2A7Q6PXP3 512 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 WDR88Q6ZMY6 472 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 H1FNTQ75WM6 255 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 MAVSQ7Z434 540 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF584Q8IVC4 421 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 UEVLDQ8IX04 471 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 SKA3Q8IX90 412 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 ANKRD42Q8N9B4 389 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 EIF1ADQ8N9N8 165 aaKnown RBP7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 ICA1LQ8NDH6 482 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 PIK3C3Q8NEB9 887 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 NFKBIDQ8NI38 313 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 MGARPQ8TDB4 240 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 RDH5Q92781 318 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF317Q96PQ6 595 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 ZBTB18Q99592 522 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 SH3GL3Q99963 347 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 TMPRSS13Q9BYE2 586 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 CENPHQ9H3R5 247 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 PIF1Q9H611 641 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 KCNK9Q9NPC2 374 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 G6PC2Q9NQR9 355 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 TAAR3PQ9P1P4 343 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 KLHL14Q9P2G3 628 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 RPS6KB2Q9UBS0 482 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 POFUT2Q9Y2G5 429 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 GRIP1Q9Y3R0 1128 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 PPIAL4AQ9Y536 164 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 PCDHGB1Q9Y5G3 927 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 NOX1Q9Y5S8 564 aa7.39□□□□□ -1.23
SHKBP1-220ENST00000599716 TRAV36DV7A0A075B6V5 113 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A087WUJ7 227 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 TMEM89A2RUT3 159 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 PLPP2O43688 288 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 TPST2O60704 377 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 MPZL1O95297 269 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 PNPP00491 289 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 BGLAPP02818 100 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ACHEP22303 614 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 AQP1P29972 269 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 GLRXP35754 106 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 HILS1P60008 231 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 MELKQ14680 651 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 FXNQ16595 210 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 TSTQ16762 297 aaKnown RBP7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 NKPD1Q17RQ9 610 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 AWAT1Q58HT5 328 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 SPRNQ5BIV9 151 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ALG10BQ5I7T1 473 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 TMEM255AQ5JRV8 349 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 C1QTNF12Q5T7M4 302 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 NHLRC1Q6VVB1 395 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 HOMEZQ8IX15 550 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 C10orf53Q8N6V4 93 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ZDHHC22Q8N966 263 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 OR6N1Q8NGY5 312 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 OR51F2Q8NH61 342 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF418Q8TF45 676 aaPredicted RBP7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 AENQ8WTP8 325 aaKnown RBP7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 OR52B2Q96RD2 323 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 FOXB1Q99853 325 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ULBP2Q9BZM5 246 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF665Q9H7R5 613 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 SLAMF8Q9P0V8 285 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 HAO1Q9UJM8 370 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 FBXO9Q9UK97 447 aaPredicted RBP7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF232Q9UNY5 417 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 RYR2Q92736 4967 aa7.38□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A096LPI6 279 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A0G2JPF8 293 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 HNRNPCL2B2RXH8 293 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 HNRNPCL3B7ZW38 293 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 BIRC5O15392 142 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 RGS16O15492 202 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 HNRNPCL1O60812 293 aaKnown RBP7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC22A3O75751 556 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 RAB36O95755 333 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 TFP02787 698 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 HNRNPCL4P0DMR1 293 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 AHCYP23526 432 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 BIDP55957 195 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 GALK2Q01415 458 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 PMS2P3Q13401 168 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 RGNQ15493 299 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 MSRB3Q8IXL7 192 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 FAM216AQ8WUB2 273 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 ZFAND2BQ8WV99 257 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC38A4Q969I6 547 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 ROPN1BQ9BZX4 212 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 PAIP1Q9H074 479 aaKnown RBP7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 MS4A5Q9H3V2 200 aa7.37□□□□□ -1.23
SHKBP1-220ENST00000599716 ROPN1Q9HAT0 212 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms