RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 T-ENOLP0DO92 83 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 OR1E2P47887 323 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 OR1Q1Q15612 314 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 C3orf36Q3SXR2 165 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 ALG10BQ5I7T1 473 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 PODNL1Q6PEZ8 512 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 SLC46A3Q7Z3Q1 461 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 CARM1Q86X55 608 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 DEFB107AQ8IZN7 70 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 ANKK1Q8NFD2 765 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 SPATA3Q8NHX4 192 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 ZNF417Q8TAU3 575 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 PROX1Q92786 737 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 ZNF587Q96SQ5 575 aaPredicted RBP16.3■□□□□ 0.2
PNKP-213ENST00000599543 CDRT15Q96T59 188 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 SELENONQ9NZV5 590 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 B3GAT1Q9P2W7 334 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 SH3GLB1Q9Y371 365 aa16.3■□□□□ 0.2
PNKP-213ENST00000599543 FBN3Q75N90 2809 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 TRAV36DV7A0A075B6V5 113 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 AKAP8O43823 692 aaKnown RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 CECR9P0C854 216 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 HOXB1P14653 301 aaPredicted RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 SERPINF1P36955 418 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 NAAAQ02083 359 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 MST1LQ2TV78 715 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 ULK3Q6PHR2 472 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 VHLLQ6RSH7 139 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 VTCN1Q7Z7D3 282 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 PGAM4Q8N0Y7 254 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 GPR137CQ8N3F9 429 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 RBM15BQ8NDT2 890 aaKnown RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 NANOS1Q8WY41 292 aaKnown RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 TAAR8Q969N4 342 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 NELFAQ9H3P2 528 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 CRNNQ9UBG3 495 aaPredicted RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 TESQ9UGI8 421 aaKnown RBP16.29■□□□□ 0.2
PNKP-213ENST00000599543 CDC42EP3Q9UKI2 254 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
PNKP-213ENST00000599543 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.28■□□□□ 0.23e-9■■■■■ 32.8
PNKP-213ENST00000599543 RPL36A-HNRNPH2H7BZ11 118 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 FZD7O75084 574 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 ZNF432O94892 652 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 UBOX5O94941 541 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 ZNF682O95780 498 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 SERPINA1P01009 418 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 OR4A8P0C604 315 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 USF1P22415 310 aaPredicted RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 GRPRP30550 384 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 PDLIM4P50479 330 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 CDH12P55289 794 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 ARF1P84077 181 aaKnown RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 MFSD13AQ14CX5 517 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 DEF8Q6ZN54 512 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 H1FNTQ75WM6 255 aaPredicted RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 RANBP3LQ86VV4 465 aaPredicted RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 FAM169BQ8N8A8 192 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 PIK3C3Q8NEB9 887 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 BHLHE22Q8NFJ8 381 aaPredicted RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 FAM162AQ96A26 154 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 SORCS2Q96PQ0 1159 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 KCNK17Q96T54 332 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 VRK1Q99986 396 aaPredicted RBP16.28■□□□□ 0.2
PNKP-213ENST00000599543 PIMREGQ9BSJ6 248 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 TMEM27Q9HBJ8 222 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 CRLF2Q9HC73 371 aa16.28■□□□□ 0.2
PNKP-213ENST00000599543 IGKV1D-42A0A075B6H8 117 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 B9A039 149 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 PDE5AO76074 875 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 IGKV3-15P01624 115 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 IGLV1-44P01699 117 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 THY1P04216 161 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 NQO1P15559 274 aaKnown RBP16.27■□□□□ 0.2
PNKP-213ENST00000599543 CBLP22681 906 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 CEACAM16Q2WEN9 425 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 ENTPD8Q5MY95 495 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 CYB5R2Q6BCY4 276 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 C16orf89Q6UX73 402 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 TRPM8Q7Z2W7 1104 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 ADPRHL1Q8NDY3 354 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 OR4F15Q8NGB8 312 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 SLC47A1Q96FL8 570 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 EPYCQ99645 322 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 GPR35Q9HC97 309 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 V9GYQ6 96 aa16.27■□□□□ 0.2
PNKP-213ENST00000599543 NDUFS8O00217 210 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 C8BP07358 591 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
PNKP-213ENST00000599543 CALCRP30988 508 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 YAP1P46937 504 aaKnown RBP16.26■□□□□ 0.19
PNKP-213ENST00000599543 CAPZA2P47755 286 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 NPRL3Q12980 569 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 GGTLC2Q14390 218 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 ADIPOQQ15848 244 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 CARTPTQ16568 116 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 UEVLDQ8IX04 471 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 OR2M2Q96R28 347 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 ASPNQ9BXN1 380 aa16.26■□□□□ 0.19
PNKP-213ENST00000599543 PCDHAC1Q9H158 963 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms