RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 FXNQ16595 210 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 GKAP1Q5VSY0 366 aaPredicted RBP18.19■□□□□ 0.5
PNKP-212ENST00000599454 GOLGA6L1Q8N7Z2 621 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 OR9I1Q8NGQ6 314 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 CLDND2Q8NHS1 167 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 SYT3Q9BQG1 590 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 EMC6Q9BV81 110 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 ULBP2Q9BZM5 246 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 EVA1AQ9H8M9 152 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 HIF1ANQ9NWT6 349 aa18.19■□□□□ 0.5
PNKP-212ENST00000599454 ZNF346Q9UL40 294 aaKnown RBP18.19■□□□□ 0.5
PNKP-212ENST00000599454 HPXP02790 462 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 MSMBP08118 114 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 HLA-DOBP13765 273 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 CBLP22681 906 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 CFPP27918 469 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 PTDSS1P48651 473 aaKnown RBP18.18■□□□□ 0.5
PNKP-212ENST00000599454 PUDPQ08623 228 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 PMS2P3Q13401 168 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 REEP3Q6NUK4 255 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 PXKQ7Z7A4 578 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 TEX29Q8N6K0 151 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 BHLHE22Q8NFJ8 381 aaPredicted RBP18.18■□□□□ 0.5
PNKP-212ENST00000599454 SEMA6DQ8NFY4 1073 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 OR6N1Q8NGY5 312 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 FOXB1Q99853 325 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 ZNF385DQ9H6B1 395 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 TMEM27Q9HBJ8 222 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 MRPL39Q9NYK5 338 aaKnown RBP18.18■□□□□ 0.5
PNKP-212ENST00000599454 SLC7A8Q9UHI5 535 aa18.18■□□□□ 0.5
PNKP-212ENST00000599454 TENM1Q9UKZ4 2725 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 ENTPD5O75356 428 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 VENTXO95231 258 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 BGLAPP02818 100 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 ARAFP10398 606 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 B4GALT1P15291 398 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 HOXB9P17482 250 aaPredicted RBP18.17■□□□□ 0.5
PNKP-212ENST00000599454 PPIBP23284 216 aaKnown RBP18.17■□□□□ 0.5
PNKP-212ENST00000599454 COL8A2P25067 703 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 ALDH3B1P43353 468 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 GIPRP48546 466 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 RAB1AP62820 205 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 GCNT6Q5T4J0 391 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 SWT1Q5T5J6 900 aaKnown RBP18.17■□□□□ 0.5
PNKP-212ENST00000599454 SHQ1Q6PI26 577 aaKnown RBP18.17■□□□□ 0.5
PNKP-212ENST00000599454 NHLRC1Q6VVB1 395 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 OR51F2Q8NH61 342 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 NFKBIDQ8NI38 313 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 TXNDC15Q96J42 360 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 TMEM43Q9BTV4 400 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 ZNF416Q9BWM5 594 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 MED29Q9NX70 200 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 ZNF224Q9NZL3 707 aa18.17■□□□□ 0.5
PNKP-212ENST00000599454 A0A0B4J2E0 115 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 A0A1B0GX12 115 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 TMEM120BA0PK00 339 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 PRORSD1PA6NEY8 169 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 FAM157AC9JC47 383 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 SLC18A1P54219 525 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 RGS8P57771 180 aaPredicted RBP18.16■□□□□ 0.5
PNKP-212ENST00000599454 CDK6Q00534 326 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 CAMK2DQ13557 499 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 MMEL1Q495T6 779 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 SLC2A7Q6PXP3 512 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 RNF217Q8TC41 542 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 ZNF418Q8TF45 676 aaPredicted RBP18.16■□□□□ 0.5
PNKP-212ENST00000599454 OR52B2Q96RD2 323 aa18.16■□□□□ 0.5
PNKP-212ENST00000599454 RSPO3Q9BXY4 272 aaPredicted RBP18.16■□□□□ 0.5
PNKP-212ENST00000599454 ZNF275Q9NSD4 429 aaPredicted RBP18.16■□□□□ 0.5
PNKP-212ENST00000599454 TRAV20A0A0B4J274 112 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 MT-ATP6P00846 226 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 GAAP10253 952 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 TCN1P20061 433 aaPredicted RBP18.15■□□□□ 0.5
PNKP-212ENST00000599454 CSNK1A1P48729 337 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 MRPL19P49406 292 aaKnown RBP18.15■□□□□ 0.5
PNKP-212ENST00000599454 SEC24CP53992 1094 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 AQP5P55064 265 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 OR1Q1Q15612 314 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 LRIF1Q5T3J3 769 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 PIWIL3Q7Z3Z3 882 aaKnown RBP18.15■□□□□ 0.5
PNKP-212ENST00000599454 MAVSQ7Z434 540 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 COMTD1Q86VU5 262 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 ZMYND19Q96E35 227 aaPredicted RBP18.15■□□□□ 0.5
PNKP-212ENST00000599454 MOGAT1Q96PD6 335 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 ZNF607Q96SK3 696 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 PLA2G12AQ9BZM1 189 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 NARFLQ9H6Q4 476 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 GPR160Q9UJ42 338 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 SLC13A4Q9UKG4 626 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 GMEB1Q9Y692 573 aa18.15■□□□□ 0.5
PNKP-212ENST00000599454 A0A1W2PPW3 197 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 SLC22A23A1A5C7 686 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 PLPP3O14495 311 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 PPIHO43447 177 aaKnown RBP18.14■□□□□ 0.49
PNKP-212ENST00000599454 TPST1O60507 370 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 SERPINA5P05154 406 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 COMPP49747 757 aaPredicted RBP18.14■□□□□ 0.49
PNKP-212ENST00000599454 SELENOVP59797 346 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 STX1BP61266 288 aa18.14■□□□□ 0.49
PNKP-212ENST00000599454 RAB39AQ14964 217 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms