RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 FREM3P0C091 2139 aa13.79□□□□□ -0.2
UPF1-206ENST00000598471 A0A1B0GTH9 108 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 SLC22A31A6NKX4 558 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 ZNF726A6NNF4 738 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 GPR171O14626 319 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 AHCYL1O43865 530 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 RAMP1O60894 148 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 SMNDC1O75940 238 aaKnown RBP eCLIP13.78□□□□□ -0.2
UPF1-206ENST00000598471 LYNP07948 512 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 KLK2P20151 261 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 EEF1B2P24534 225 aaKnown RBP13.78□□□□□ -0.2
UPF1-206ENST00000598471 CDH11P55287 796 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 BIDP55957 195 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 RASGEF1BQ0VAM2 473 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 TMED1Q13445 227 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 SLC17A1Q14916 467 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 PON3Q15166 354 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 RNPS1Q15287 305 aaKnown RBP13.78□□□□□ -0.2
UPF1-206ENST00000598471 ARMC4Q5T2S8 1044 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 LCN1P1Q5VSP4 162 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 AADACL4Q5VUY2 407 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 GTF2IRD2BQ6EKJ0 949 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 DNM1P34Q6PK57 102 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 GTF2IRD2Q86UP8 949 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 CISD2Q8N5K1 135 aaKnown RBP13.78□□□□□ -0.2
UPF1-206ENST00000598471 CYB561A3Q8NBI2 242 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 NPEPL1Q8NDH3 523 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 OR6X1Q8NH79 312 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 ZPLD1Q8TCW7 415 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 FAR1Q8WVX9 515 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 IPCEF1Q8WWN9 437 aaPredicted RBP13.78□□□□□ -0.2
UPF1-206ENST00000598471 ZNF696Q9H7X3 374 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 CCNB1IP1Q9NPC3 277 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 MED29Q9NX70 200 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 TNFRSF10DQ9UBN6 386 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 MGAQ8IWI9 3026 aa13.78□□□□□ -0.2
UPF1-206ENST00000598471 DSPP15924 2871 aaKnown RBP13.77□□□□□ -0.2
UPF1-206ENST00000598471 IRGMA1A4Y4 181 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 PRSS37A4D1T9 235 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 EFCAB10A6NFE3 127 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 SLC22A20A6NK97 555 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CLCA1A8K7I4 914 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CENPBD1B2RD01 187 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CACNA1GO43497 2377 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 XPNPEP2O43895 674 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 IGHG1P01857 330 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CRHBPP24387 322 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 HTR1FP30939 366 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 PTGS2P35354 604 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CDKN2AP42771 156 aaKnown RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 SLC25A1P53007 311 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 NUDT6P53370 316 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 SLC16A1P53985 500 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CLDN17P56750 224 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 RPS7P62081 194 aaKnown RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 SMN1Q16637 294 aaKnown RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 KLHL12Q53G59 568 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 SOWAHCQ53LP3 525 aaPredicted RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 ZNF362Q5T0B9 420 aaPredicted RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 LAIR2Q6ISS4 152 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 NIPAL3Q6P499 406 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 CREB3L2Q70SY1 520 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 P4HA3Q7Z4N8 544 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 ZNF540Q8NDQ6 660 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 OR2T4Q8NH00 348 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 FNDC8Q8TC99 324 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 RNF128Q8TEB7 428 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 TUBA1CQ9BQE3 449 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 ALG12Q9BV10 488 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 OR51V1Q9H2C8 321 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 WARS2Q9UGM6 360 aaKnown RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 KMT2BQ9UMN6 2715 aaPredicted RBP13.77□□□□□ -0.21
UPF1-206ENST00000598471 RCE1Q9Y256 329 aa13.77□□□□□ -0.21
UPF1-206ENST00000598471 OR6C68A6NDL8 312 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 AHRRA9YTQ3 701 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 CLRN1P58418 232 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 ZNF91Q05481 1191 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 APOFQ13790 326 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 KLHL22Q53GT1 634 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 SLC35D3Q5M8T2 416 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 MEPCEQ7L2J0 689 aaKnown RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 BCDIN3DQ7Z5W3 292 aaKnown RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 OR9Q1Q8NGQ5 310 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 FNDC9Q8TBE3 224 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 MYDGFQ969H8 173 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 WBP1Q96G27 269 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 SLC25A44Q96H78 314 aaPredicted RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 TXNDC15Q96J42 360 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 NMNAT2Q9BZQ4 307 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 MED20Q9H944 212 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 RNF122Q9H9V4 155 aa13.76□□□□□ -0.21
UPF1-206ENST00000598471 RPRD1BQ9NQG5 326 aaKnown RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 CNOT2Q9NZN8 540 aaKnown RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
UPF1-206ENST00000598471 PSORS1C1Q9UIG5 152 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms