RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 RAD52P43351 418 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 CCT5P48643 541 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 HOXC5Q00444 222 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 RELBQ01201 579 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 GLO1Q04760 184 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 CKAP4Q07065 602 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 TSTQ16762 297 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 SPANXN4Q5MJ08 99 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 RGS7BPQ6MZT1 257 aaPredicted RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 NHLRC1Q6VVB1 395 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 PNPT1Q8TCS8 783 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 STK35Q8TDR2 534 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 POP5Q969H6 163 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 TAAR8Q969N4 342 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 SLC25A28Q96A46 364 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 TXNDC15Q96J42 360 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 PPP1R36Q96LQ0 422 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 GAL3ST1Q99999 423 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 RSPO3Q9BXY4 272 aaPredicted RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 MTHFD2LQ9H903 347 aaPredicted RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 NKIRAS2Q9NYR9 191 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 NOP53Q9NZM5 478 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 MID2Q9UJV3 735 aa9.23□□□□□ -0.93
ZNF548-207ENST00000597400 PURGQ9UJV8 347 aaKnown RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 ZNF443Q9Y2A4 671 aaPredicted RBP9.23□□□□□ -0.93
ZNF548-207ENST00000597400 IGKV1D-42A0A075B6H8 117 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 IGHV3OR16-10A0A075B7F0 116 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 MS4A18H0YCH9 400 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 RAB36O95755 333 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 IGHV4-38-2P0DP08 117 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 KLF3P57682 345 aaPredicted RBP9.22□□□□□ -0.93
ZNF548-207ENST00000597400 EMX2Q04743 252 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 ZNF154Q13106 437 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 C1DQ13901 141 aaKnown RBP9.22□□□□□ -0.93
ZNF548-207ENST00000597400 MS4A18Q3C1V0 323 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 PCGF3Q3KNV8 242 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 RPS26P11Q5JNZ5 115 aaPredicted RBP9.22□□□□□ -0.93
ZNF548-207ENST00000597400 RNF220Q5VTB9 566 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 TMEM154Q6P9G4 183 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 SPATC1Q76KD6 591 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 SKA3Q8IX90 412 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 ZNF440Q8IYI8 595 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 KIR3DL3Q8N743 410 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 OR52P1PQ8NH57 321 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 MGARPQ8TDB4 240 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 EPS8L3Q8TE67 593 aaKnown RBP9.22□□□□□ -0.93
ZNF548-207ENST00000597400 TEX37Q96LM6 180 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 FOXB1Q99853 325 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 CITED1Q99966 193 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 DPY30Q9C005 99 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 MMP27Q9H306 513 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 SAP30LQ9HAJ7 183 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 NPHS2Q9NP85 383 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 SLC6A13Q9NSD5 602 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 UBAP1Q9NZ09 502 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 SLC17A7Q9P2U7 560 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 MMP24Q9Y5R2 645 aa9.22□□□□□ -0.93
ZNF548-207ENST00000597400 PPIAL4EA0A075B759 164 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 A0A096LPI6 279 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 PPIAL4CA0A0B4J2A2 164 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 ISPDA4D126 451 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 SMIM23A6NLE4 172 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 PPIAL4DF5H284 164 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 AIM2O14862 343 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 UBOX5O94941 541 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 GPANK1O95872 356 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 SERPINA5P05154 406 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 OR8G3PP0DMU2 310 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 PPIAL4FP0DN26 164 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 NR2F1P10589 423 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 ZNF12P17014 697 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 NCF2P19878 526 aaPredicted RBP9.21□□□□□ -0.94
ZNF548-207ENST00000597400 GTF2E2P29084 291 aaKnown RBP9.21□□□□□ -0.94
ZNF548-207ENST00000597400 PCGF2P35227 344 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 ATP4BP51164 291 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 MVDP53602 400 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 CAMK2DQ13557 499 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 HFEQ30201 348 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 LIN52Q52LA3 116 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 WDR88Q6ZMY6 472 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 COMTD1Q86VU5 262 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 PEX5LQ8IYB4 626 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 GLB1L3Q8NCI6 653 aaPredicted RBP9.21□□□□□ -0.94
ZNF548-207ENST00000597400 SYNPRQ8TBG9 265 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 SNX33Q8WV41 574 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 TESCQ96BS2 214 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 TRIM44Q96DX7 344 aaPredicted RBP9.21□□□□□ -0.94
ZNF548-207ENST00000597400 CCDC115Q96NT0 180 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 GPA33Q99795 319 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 GRPEL1Q9HAV7 217 aa9.21□□□□□ -0.94
ZNF548-207ENST00000597400 LOC102725191A0A1B0GVB3 256 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 ZSCAN5BA6NJL1 495 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 TPD52L2O43399 206 aaKnown RBP9.2□□□□□ -0.94
ZNF548-207ENST00000597400 UBL3O95164 117 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 TSPAN15O95858 294 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 IGHV1-46P01743 117 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 BCHEP06276 602 aa9.2□□□□□ -0.94
ZNF548-207ENST00000597400 COPZ1P61923 177 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms