RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 LUZP2Q86TE4 346 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 KDM8Q8N371 416 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 DHRSXQ8N5I4 330 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 TEX47Q8TBZ9 253 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 CYGBQ8WWM9 190 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 ZHX1-C8orf76Q96EF9 292 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 GMPPAQ96IJ6 420 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 NAA11Q9BSU3 229 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 SFXN3Q9BWM7 321 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 OPN3Q9H1Y3 402 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 TBC1D23Q9NUY8 699 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 JKAMPQ9P055 326 aa13.31□□□□□ -0.28
TRIM28-207ENST00000597136 PLEKHB1Q9UF11 243 aaPredicted RBP13.31□□□□□ -0.28
TRIM28-207ENST00000597136 ROS1P08922 2347 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF716A6NP11 495 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 SS18L1O75177 396 aaPredicted RBP13.3□□□□□ -0.28
TRIM28-207ENST00000597136 SMNDC1O75940 238 aaKnown RBP eCLIP13.3□□□□□ -0.281e-7■■■□□ 16.9
TRIM28-207ENST00000597136 OR6A2O95222 327 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 CRHP06850 196 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 EDNRAP25101 427 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 AGTR1P30556 359 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 GIPRP48546 466 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ADARB1P78563 741 aaKnown RBP13.3□□□□□ -0.28
TRIM28-207ENST00000597136 CDK5Q00535 292 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 PUDPQ08623 228 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ZP4Q12836 540 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
TRIM28-207ENST00000597136 SLC25A35Q3KQZ1 300 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ALG10Q5BKT4 473 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 CLEC12AQ5QGZ9 265 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 TMEM236Q5W0B7 351 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
TRIM28-207ENST00000597136 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 MCEMP1Q8IX19 187 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 SLC43A2Q8N370 569 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF610Q8N9Z0 462 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 LRRC75AQ8NAA5 344 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 OR52L1Q8NGH7 329 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 TFAP2CQ92754 450 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF570Q96NI8 536 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 ADI1Q9BV57 179 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 TSSK6Q9BXA6 273 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 C12orf49Q9H741 205 aa13.3□□□□□ -0.28
TRIM28-207ENST00000597136 NPDC1Q9NQX5 325 aaPredicted RBP13.3□□□□□ -0.28
TRIM28-207ENST00000597136 UNC79Q9P2D8 2635 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 LOC100130705A0A1B0GUX0 176 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 ZAR1LA6NP61 321 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 EEF1E1-BLOC1S5C9J1V9 151 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 MCIDASD6RGH6 385 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 C11orf98E9PRG8 122 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 SLC16A6O15403 523 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 EEF1E1O43324 174 aaKnown RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 RNF13O43567 381 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 YES1P07947 543 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 AHCYP23526 432 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 SLC6A6P31641 620 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 RPL4P36578 427 aaKnown RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 CAPGP40121 348 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 GINS1Q14691 196 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 RNPS1Q15287 305 aaKnown RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 C6orf52Q5T4I8 152 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 SP5Q6BEB4 398 aaPredicted RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 ABLIM2Q6H8Q1 611 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 IGFN1Q86VF2 1251 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 IQCF1Q8N6M8 205 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 HRASLS5Q96KN8 279 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 FANCFQ9NPI8 374 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 B3GAT1Q9P2W7 334 aa13.29□□□□□ -0.28
TRIM28-207ENST00000597136 NDRG4Q9ULP0 352 aaKnown RBP13.29□□□□□ -0.28
TRIM28-207ENST00000597136 LOC102725191A0A1B0GVB3 256 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 A8MXE2 369 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 H0YAE9 185 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 BHLHE40O14503 412 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 F13BP05160 661 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 CD14P08571 375 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 TTC23Q5W5X9 447 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 TMEM225Q6GV28 225 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 ACSM5Q6NUN0 579 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF474Q6S9Z5 364 aaPredicted RBP13.28□□□□□ -0.28
TRIM28-207ENST00000597136 DPY19L2P2Q6ZN68 376 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 ZNF555Q8NEP9 628 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 OR2T33Q8NG76 320 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 OR4Q3Q8NH05 313 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 PITX2Q99697 317 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 KATNB1Q9BVA0 655 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 IFT27Q9BW83 186 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 NDEL1Q9GZM8 345 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 BCO1Q9HAY6 547 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 SLC25A19Q9HC21 320 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 NRIP3Q9NQ35 241 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 PLSCR4Q9NRQ2 329 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 INIPQ9NRY2 104 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 GLRX2Q9NS18 164 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 RASD1Q9Y272 281 aa13.28□□□□□ -0.28
TRIM28-207ENST00000597136 KLF2Q9Y5W3 355 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms