RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ARF1P84077 181 aaKnown RBP9.74□□□□□ -0.85
LIG1-211ENST00000596457 TRAP1Q12931 704 aaKnown RBP9.74□□□□□ -0.85
LIG1-211ENST00000596457 SEC23BQ15437 767 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CEACAM16Q2WEN9 425 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 FAM98BQ52LJ0 330 aaKnown RBP9.74□□□□□ -0.85
LIG1-211ENST00000596457 HIKESHIQ53FT3 197 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 TIMM23BQ5SRD1 257 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 OR7E24Q6IFN5 339 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 OAFQ86UD1 273 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 SPATA24Q86W54 205 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 OR13C2Q8NGS9 318 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 SLC7A13Q8TCU3 470 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ALPK1Q96QP1 1244 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ZNF347Q96SE7 839 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CADM1Q9BY67 442 aaKnown RBP9.74□□□□□ -0.85
LIG1-211ENST00000596457 LINC00470Q9BZP3 86 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 TRIM15Q9C019 465 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 LIME1Q9H400 295 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ANKRD19PQ9H560 264 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 CRLF2Q9HC73 371 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 NGBQ9NPG2 151 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 IL1RAPQ9NPH3 570 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 TMCC3Q9ULS5 477 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 POFUT2Q9Y2G5 429 aa9.74□□□□□ -0.85
LIG1-211ENST00000596457 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
LIG1-211ENST00000596457 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 A0A1W2PRQ8 180 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 FAM221AA4D161 298 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 OR5H1A6NKK0 313 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 M0R1B8 84 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 PDLIM1O00151 329 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 CDC42EP2O14613 210 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 OR10H3O60404 316 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 PLAUP00749 431 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 IGF2P01344 180 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 RPL4P36578 427 aaKnown RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 CAPZA2P47755 286 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 ZNF83P51522 516 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 CLRN1P58418 232 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 TUBA1BP68363 451 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 TUBA4AP68366 448 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 MYBPC1Q00872 1141 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 PPP1R8Q12972 351 aaKnown RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 DGCR6Q14129 220 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 FLOT2Q14254 428 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 IQCCQ4KMZ1 466 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 ALG10Q5BKT4 473 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 BEX5Q5H9J7 111 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 KLHL24Q6TFL4 600 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 TUBA1AQ71U36 451 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 CDH24Q86UP0 819 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 C20orf196Q8IYI0 205 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 TMEM123Q8N131 208 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 OR4K5Q8NGD3 323 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 OR1K1Q8NGR3 316 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 ZNF566Q969W8 418 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 ZNF837Q96EG3 531 aaPredicted RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 ADAD1Q96M93 576 aaKnown RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 MUS81Q96NY9 551 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 HS3ST6Q96QI5 342 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 USB1Q9BQ65 265 aaKnown RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 ULBP2Q9BZM5 246 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 UBTD1Q9HAC8 227 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 KRCC1Q9NPI7 259 aaPredicted RBP9.73□□□□□ -0.85
LIG1-211ENST00000596457 SLC17A5Q9NRA2 495 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 TMEM5Q9Y2B1 443 aa9.73□□□□□ -0.85
LIG1-211ENST00000596457 SH3PXD2BA1X283 911 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 HTR3EA5X5Y0 456 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 UNC119BA6NIH7 251 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 TNFRSF11BO00300 401 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ACOT8O14734 319 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ACVR1BP36896 505 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 SLC9A3P48764 834 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 PRPS1P60891 318 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 UBE2NP61088 152 aaKnown RBP9.72□□□□□ -0.85
LIG1-211ENST00000596457 ACKR1Q16570 336 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 TBRG1Q3YBR2 411 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ZBED5Q49AG3 693 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 PGM2L1Q6PCE3 622 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 NHLRC1Q6VVB1 395 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 CCDC121Q6ZUS5 278 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 TMPRSS11FQ6ZWK6 438 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 P2RY8Q86VZ1 359 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 WDR31Q8NA23 367 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 SYT14Q8NB59 555 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 OR6X1Q8NH79 312 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 LIPHQ8WWY8 451 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ASB10Q8WXI3 467 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ESRP2Q9H6T0 727 aaKnown RBP9.72□□□□□ -0.85
LIG1-211ENST00000596457 MAGIXQ9H6Y5 334 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 GLTPQ9NZD2 209 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 NPAP1Q9NZP6 1156 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 IL20RAQ9UHF4 553 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 ZNF346Q9UL40 294 aaKnown RBP9.72□□□□□ -0.85
LIG1-211ENST00000596457 POMPQ9Y244 141 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 HIF3AQ9Y2N7 669 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 AMDHD2Q9Y303 409 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 SLC25A15Q9Y619 301 aa9.72□□□□□ -0.85
LIG1-211ENST00000596457 A0A1W2PPR1 153 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms