RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 BLOC1S5-TXNDC5H3BN57 136 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 M0R1B8 84 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 ARPC2O15144 300 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 RNF13O43567 381 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 OR6A2O95222 327 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 F13BP05160 661 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 SOD3P08294 240 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 DANCRP0C864 163 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 UMPSP11172 480 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 MAKP20794 623 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 SH3BGRP55822 239 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 PRPS1P60891 318 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 ADAM8P78325 824 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 VLDLRP98155 873 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 TRAM2Q15035 370 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 PGGHGQ32M88 737 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 SAMD4BQ5PRF9 694 aaKnown RBP9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 C1QTNF12Q5T7M4 302 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 ANKRD16Q6P6B7 361 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 TBPL2Q6SJ96 375 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 TMEM108Q6UXF1 575 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 B3GLCTQ6Y288 498 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 MYPOPQ86VE0 399 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 NRMQ8IXM6 262 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 GPR137CQ8N3F9 429 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 CCDC197Q8NCU1 140 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 WFDC11Q8NEX6 87 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 OR6X1Q8NH79 312 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 MOSPD2Q8NHP6 518 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 MAGEE2Q8TD90 523 aaPredicted RBP9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 TMEM54Q969K7 222 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 PIGTQ969N2 578 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 FBXW5Q969U6 566 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 FNDC11Q9BVV2 318 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 SEC61A2Q9H9S3 476 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 OBP2BQ9NPH6 170 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 NDUFAF4Q9P032 175 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 MAGEL2Q9UJ55 1249 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 RPS6KA6Q9UK32 745 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 ENPP4Q9Y6X5 453 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 C2CD3Q4AC94 2353 aa9.59□□□□□ -0.87
SHKBP1-206ENST00000595523 CR1P17927 2039 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF99A8MXY4 864 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 E7EQL1 145 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 CD8AP01732 235 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 HIST1H2ABP04908 130 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 PGA4P0DJD7 388 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 PGA3P0DJD8 388 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 IFI30P13284 250 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 PTAFRP25105 342 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 AQP2P41181 271 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 CDH11P55287 796 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 RPS4XP62701 263 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 PRKCDQ05655 676 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 RUNX1T1Q06455 604 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 KLHL17Q6TDP4 642 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 C16orf89Q6UX73 402 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 RINLQ6ZS11 566 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 HIST3H2AQ7L7L0 130 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF627Q7L945 461 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 TGIF2LYQ8IUE0 185 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 PIAS4Q8N2W9 510 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 SLC7A13Q8TCU3 470 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ACOT11Q8WXI4 607 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 HIST1H2ACQ93077 130 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 BPIFA2Q96DR5 249 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 NSL1Q96IY1 281 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ADAD1Q96M93 576 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 SEPHS2Q99611 448 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 FUZQ9BT04 418 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 NMNAT1Q9HAN9 279 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 NOX3Q9HBY0 568 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF224Q9NZL3 707 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 CRNNQ9UBG3 495 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 SAMD4AQ9UPU9 718 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 LAMP3Q9UQV4 416 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 HIF3AQ9Y2N7 669 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 MAGED1Q9Y5V3 778 aaPredicted RBP9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 V9GYQ6 96 aa9.58□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF726A6NNF4 738 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 B2RBV5 119 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ATP6V1G2-DDX39BF2Z307 99 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 hCG_2039718K7EN88 272 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 OVOL3O00110 214 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 CDC42EP2O14613 210 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 SMPD2O60906 423 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 DIRAS1O95057 198 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 WNT11O96014 354 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 IGKV3-15P01624 115 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 CELA3BP08861 270 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 PAX1P15863 534 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 ZNF26P17031 533 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 CSNK1A1P48729 337 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 PTH2RP49190 550 aa9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 NKX6-1P78426 367 aaPredicted RBP9.57□□□□□ -0.88
SHKBP1-206ENST00000595523 MXRA7P84157 204 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms