RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ATP12AP54707 1039 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 SLC37A1P57057 533 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 LSM11P83369 360 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCAF1-202ENST00000595242 OR1Q1Q15612 314 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 FNDC7Q5VTL7 733 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 MEDAGQ5VYS4 303 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 RNLSQ5VYX0 342 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF704Q6ZNC4 412 aaPredicted RBP11.43□□□□□ -0.58
SCAF1-202ENST00000595242 C22orf34Q6ZV56 151 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ADGRE4PQ86SQ3 457 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 LSMEM1Q8N8F7 131 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ROBO4Q8WZ75 1007 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ART5Q96L15 291 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF426Q9BUY5 554 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 FUNDC2Q9BWH2 189 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 PRR14Q9BWN1 585 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 ITPAQ9BY32 194 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 PRRG3Q9BZD7 231 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 NAA50Q9GZZ1 169 aaKnown RBP11.43□□□□□ -0.58
SCAF1-202ENST00000595242 IL20Q9NYY1 176 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 SLC7A7Q9UM01 511 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 LAMP3Q9UQV4 416 aa11.43□□□□□ -0.58
SCAF1-202ENST00000595242 A0A0B4J2E0 115 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 A0A1B0GX12 115 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 M0R129 80 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CHP2O43745 196 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 GPRIN2O60269 458 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 SNX4O95219 450 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
SCAF1-202ENST00000595242 ACTL6AO96019 429 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
SCAF1-202ENST00000595242 PRG2P13727 222 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CPN1P15169 458 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CCNA2P20248 432 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 POU1F1P28069 291 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CCKARP32238 428 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 RBM34P42696 430 aaKnown RBP11.42□□□□□ -0.58
SCAF1-202ENST00000595242 PPICP45877 212 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 MAP2K4P45985 399 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CTBP2P56545 445 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 HOXC5Q00444 222 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 SRYQ05066 204 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 PRKCDQ05655 676 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 GINS1Q14691 196 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 NTRK2Q16620 822 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 PDZK1Q5T2W1 519 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 BICRALQ6AI39 1079 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF620Q6ZNG0 422 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 RRM2BQ7LG56 351 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF611Q8N823 705 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 FAM71CQ8NEG0 241 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 OR8D4Q8NGM9 314 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TEX47Q8TBZ9 253 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM255BQ8WV15 326 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TRMT61AQ96FX7 289 aaKnown RBP11.42□□□□□ -0.58
SCAF1-202ENST00000595242 SENP5Q96HI0 755 aaPredicted RBP11.42□□□□□ -0.58
SCAF1-202ENST00000595242 HS6ST2Q96MM7 605 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TRIM2Q9C040 744 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 MED17Q9NVC6 651 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM5Q9Y2B1 443 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 CDH10Q9Y6N8 788 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 TENM1Q9UKZ4 2725 aa11.42□□□□□ -0.58
SCAF1-202ENST00000595242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 A0A1W2PNV4 684 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 FRG2CA6NGY1 282 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 C16orf97H3BN30 126 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 DYRK3O43781 588 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 BCAS1O75363 584 aaPredicted RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 IL33O95760 270 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 PLAUP00749 431 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 ACVR1BP36896 505 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 TGFBR2P37173 567 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 ACAA2P42765 397 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 NUDT6P53370 316 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 RPS4XP62701 263 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 PSPHP78330 225 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 CTF1Q16619 201 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 SLC27A4Q6P1M0 643 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF474Q6S9Z5 364 aaPredicted RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 LINC00114Q6XXX2 140 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 TMPRSS11FQ6ZWK6 438 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 YRDCQ86U90 279 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 NRMQ8IXM6 262 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 ZNF440Q8IYI8 595 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 SLC43A2Q8N370 569 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 FAM83FQ8NEG4 500 aaPredicted RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM163Q8TC26 289 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 CNOT9Q92600 299 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 OSTF1Q92882 214 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 STARD4Q96DR4 205 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 FAM46AQ96IP4 442 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 GAL3ST4Q96RP7 486 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 HOXD1Q9GZZ0 328 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 TMEM27Q9HBJ8 222 aa11.41□□□□□ -0.58
SCAF1-202ENST00000595242 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
SCAF1-202ENST00000595242 ELOVL5Q9NYP7 299 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms