RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 LRR1Q96L50 414 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 TSPAN32Q96QS1 320 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 OR2M2Q96R28 347 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 SLC29A1Q99808 456 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 LINC00470Q9BZP3 86 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 MED29Q9NX70 200 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 IL20RAQ9UHF4 553 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 ENOPH1Q9UHY7 261 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 ZNF346Q9UL40 294 aaKnown RBP10.68□□□□□ -0.7
APOC1-206ENST00000590334 ADAM18Q9Y3Q7 739 aa10.68□□□□□ -0.7
APOC1-206ENST00000590334 RP1L1Q8IWN7 2480 aaPredicted RBP10.68□□□□□ -0.7
APOC1-206ENST00000590334 OR6C65A6NJZ3 312 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 PYCARD-AS1I3L0S3 204 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 MSTNO14793 375 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 IDH3BO43837 385 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SOX14O95416 240 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 BCL10O95999 233 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 IGFBP1P08833 259 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 BMP5P22003 454 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SDHAP31040 664 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SELENOPP49908 381 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 RPS6KA3P51812 740 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 BIDP55957 195 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 ERVK-25P63136 954 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 CDK5Q00535 292 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SRSF1Q07955 248 aaKnown RBP eCLIP10.67□□□□□ -0.7
APOC1-206ENST00000590334 TRIP10Q15642 601 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SLC25A35Q3KQZ1 300 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 GPR139Q6DWJ6 353 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 NIPAL3Q6P499 406 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 CASP12Q6UXS9 341 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 MRGPRGQ86SM5 289 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 LNX2Q8N448 690 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 ZNF808Q8N4W9 903 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 ARIH2OSQ8N7S6 290 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 RELL2Q8NC24 303 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 OR52L1Q8NGH7 329 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 MAGEE2Q8TD90 523 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 ITLN2Q8WWU7 325 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 EMC6Q9BV81 110 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 GABARAPL3Q9BY60 117 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 POLDIP3Q9BY77 421 aaKnown RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 MRPL13Q9BYD1 178 aaKnown RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 C12orf49Q9H741 205 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 TBC1D23Q9NUY8 699 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 FOXD3Q9UJU5 478 aaPredicted RBP10.67□□□□□ -0.7
APOC1-206ENST00000590334 PROCRQ9UNN8 238 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 BAIAP2Q9UQB8 552 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 FREM1Q5H8C1 2179 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 NBASA2RRP1 2371 aa10.67□□□□□ -0.7
APOC1-206ENST00000590334 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
APOC1-206ENST00000590334 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 A6NIZ1 184 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ZNF726A6NNF4 738 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 A8MXE2 369 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 E9PQ18 207 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 H3BN98 237 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 AHCYL1O43865 530 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ZG16O60844 167 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 MITFO75030 526 aaPredicted RBP10.66□□□□□ -0.7
APOC1-206ENST00000590334 SLC43A1O75387 559 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 SERPINI2O75830 405 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 PPP1R3DO95685 299 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 PGA4P0DJD7 388 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 PGA3P0DJD8 388 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ACADSP16219 412 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 EDNRAP25101 427 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 PEX2P28328 305 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 GIPRP48546 466 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 PCYT1AP49585 367 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 CRISP1P54107 249 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 RAP1BP61224 184 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 RAP1AP62834 184 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 MELKQ14680 651 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 LPCAT4Q643R3 524 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 C20orf196Q8IYI0 205 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ZNF100Q8IYN0 542 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ZNF610Q8N9Z0 462 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 POMGNT2Q8NAT1 580 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 OR2T33Q8NG76 320 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 OR4Q3Q8NH05 313 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 TEX47Q8TBZ9 253 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 TMEM54Q969K7 222 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 APH1AQ96BI3 265 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 Q96M85 177 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ZNF570Q96NI8 536 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 RDH12Q96NR8 316 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 ERMAPQ96PL5 475 aaPredicted RBP10.66□□□□□ -0.7
APOC1-206ENST00000590334 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 IFT27Q9BW83 186 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 TSSK6Q9BXA6 273 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 SLCO5A1Q9H2Y9 848 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 SLC25A19Q9HC21 320 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 GRHPRQ9UBQ7 328 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 MALT1Q9UDY8 824 aa10.66□□□□□ -0.7
APOC1-206ENST00000590334 IER3IP1Q9Y5U9 82 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms