RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ETV6P41212 452 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SUMO3P55854 103 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 RPS15AP62244 130 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SRYQ05066 204 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SLC13A2Q13183 592 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 MAD2L1BPQ15013 274 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 TBCEQ15813 527 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SPANXN4Q5MJ08 99 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 C1QTNF12Q5T7M4 302 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 DEPDC1Q5TB30 811 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SLX4IPQ5VYV7 408 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 OR2T5Q6IEZ7 315 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ERICH5Q6P6B1 374 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SCIMPQ6UWF3 145 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 PEG10Q86TG7 708 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 CYP4Z1Q86W10 505 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 HS3ST5Q8IZT8 346 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 CNEP1R1Q8N9A8 125 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 KBTBD8Q8NFY9 601 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 OR9A1PQ8NGU1 263 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 OR2T29Q8NH02 315 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 OR10A6Q8NH74 314 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ZPLD1Q8TCW7 415 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SMAP2Q8WU79 429 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 FIG4Q92562 907 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SLC9A6Q92581 669 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 RORBQ92753 470 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ITCHQ96J02 903 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SGCZQ96LD1 299 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ZFP3Q96NJ6 502 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 PKP4Q99569 1192 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 DPY30Q9C005 99 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 AICDAQ9GZX7 198 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 MMP27Q9H306 513 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 IL1RAPQ9NPH3 570 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ACOT13Q9NPJ3 140 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 CCDC59Q9P031 241 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 ERVK-18Q9QC07 812 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 UTS2RQ9UKP6 389 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SAMD4AQ9UPU9 718 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 SLC22A7Q9Y694 548 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 DYNC2H1Q8NCM8 4307 aaKnown RBP6.83□□□□□ -1.32
SMAD4-209ENST00000589941 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
SMAD4-209ENST00000589941 C16orf97H3BN30 126 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 NDUFS4O43181 175 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 RGS10O43665 173 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SCN2BO60939 215 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 E2F6O75461 281 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 WBP4O75554 376 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 UPK1BO75841 260 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 LY6HO94772 140 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SNX4O95219 450 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 CGAP01215 116 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 MT-ND2P03891 347 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ABCB1P08183 1280 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 PCNAP12004 261 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 BCKDHAP12694 445 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ALOX12P18054 663 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 GPX2P18283 190 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 DAPP51397 102 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 LOXL3P58215 753 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 RPL38P63173 70 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SELENBP1Q13228 472 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 NPTX1Q15818 432 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 PHKG1Q16816 387 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF181Q2M3W8 571 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF362Q5T0B9 420 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SLC22A10Q63ZE4 541 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 TMEM53Q6P2H8 277 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 CLEC2AQ6UVW9 174 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 HSDL2Q6YN16 418 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 EIF3MQ7L2H7 374 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ZNF551Q7Z340 670 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 YRDCQ86U90 279 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ARMC8Q8IUR7 673 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ZDHHC21Q8IVQ6 265 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 CA13Q8N1Q1 262 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 L3MBTL4Q8NA19 623 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 FBXO30Q8TB52 745 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 NDNFQ8TB73 568 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 C10orf105Q8TEF2 133 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ATL1Q8WXF7 558 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SLC38A4Q969I6 547 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 FAM162AQ96A26 154 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SPACA9Q96E40 222 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 METTL2AQ96IZ6 378 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 APOL4Q9BPW4 351 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 DOHHQ9BU89 302 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SPNS1Q9H2V7 528 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 DSN1Q9H410 356 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SLC6A13Q9NSD5 602 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 SCN3BQ9NY72 215 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 WARS2Q9UGM6 360 aaKnown RBP6.82□□□□□ -1.32
SMAD4-209ENST00000589941 B3GALT5Q9Y2C3 310 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ORC6Q9Y5N6 252 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 V9GYQ6 96 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 ARFGEF3Q5TH69 2177 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 PCLOQ9Y6V0 5065 aa6.82□□□□□ -1.32
SMAD4-209ENST00000589941 NCF1BA6NI72 391 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-209ENST00000589941 NCF1CA8MVU1 366 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms