RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GPR6P46095 362 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-204ENST00000588687 POLR2JP52435 117 aaKnown RBP15.79■□□□□ 0.12
CCDC43-204ENST00000588687 AQP5P55064 265 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 LMO4P61968 165 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 MRPS11P82912 194 aaKnown RBP15.79■□□□□ 0.12
CCDC43-204ENST00000588687 PIGFQ07326 219 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 ALG10BQ5I7T1 473 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 C6orf10Q5SRN2 563 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 FAM91A1Q658Y4 838 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 SLC2A7Q6PXP3 512 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 C12orf54Q6X4T0 127 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 ZNF813Q6ZN06 617 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 DNAJA4Q8WW22 397 aaPredicted RBP15.79■□□□□ 0.12
CCDC43-204ENST00000588687 MS4A5Q9H3V2 200 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 NARFLQ9H6Q4 476 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 CACYBPQ9HB71 228 aaKnown RBP15.79■□□□□ 0.12
CCDC43-204ENST00000588687 CORINQ9Y5Q5 1042 aa15.79■□□□□ 0.12
CCDC43-204ENST00000588687 TMEM247A6NEH6 219 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 LRRN3E7EW58 273 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 CLIC1O00299 241 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 GAAP10253 952 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 GIPRP48546 466 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 PTDSS1P48651 473 aaKnown RBP15.78■□□□□ 0.12
CCDC43-204ENST00000588687 NXNQ6DKJ4 435 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 ULK3Q6PHR2 472 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 FGFBP3Q8TAT2 258 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 RDH5Q92781 318 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 ZBTB9Q96C00 473 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 FOXB1Q99853 325 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 LPAR2Q9HBW0 351 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 KCNK9Q9NPC2 374 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 MRPL39Q9NYK5 338 aaKnown RBP15.78■□□□□ 0.12
CCDC43-204ENST00000588687 RPS6KB2Q9UBS0 482 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 TESQ9UGI8 421 aaKnown RBP15.78■□□□□ 0.12
CCDC43-204ENST00000588687 FZR1Q9UM11 496 aa15.78■□□□□ 0.12
CCDC43-204ENST00000588687 PUDPQ08623 228 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 TRMT5Q32P41 509 aaKnown RBP15.77■□□□□ 0.12
CCDC43-204ENST00000588687 LRIF1Q5T3J3 769 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 WDR88Q6ZMY6 472 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 ANKRD42Q8N9B4 389 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 NFKBIDQ8NI38 313 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 PAIP2Q9BPZ3 127 aaKnown RBP15.77■□□□□ 0.12
CCDC43-204ENST00000588687 ULBP2Q9BZM5 246 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 DENND2DQ9H6A0 471 aaPredicted RBP15.77■□□□□ 0.12
CCDC43-204ENST00000588687 ZNF385DQ9H6B1 395 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 G6PC2Q9NQR9 355 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 TREM2Q9NZC2 230 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 NOX1Q9Y5S8 564 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 GMEB1Q9Y692 573 aa15.77■□□□□ 0.12
CCDC43-204ENST00000588687 TRBV5-3A0A0A0MS03 114 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 PLPP3O14495 311 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 AVPP01185 164 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 NAT2P11245 290 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 NQO1P15559 274 aaKnown RBP15.76■□□□□ 0.11
CCDC43-204ENST00000588687 MRPL19P49406 292 aaKnown RBP15.76■□□□□ 0.11
CCDC43-204ENST00000588687 ARFIP2P53365 341 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 RPS23P62266 143 aaKnown RBP15.76■□□□□ 0.11
CCDC43-204ENST00000588687 RAB1AP62820 205 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 CAMK2DQ13557 499 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 CEP85LQ5SZL2 805 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 SLC47A1Q96FL8 570 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 LRRC37BQ96QE4 947 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 RAD21L1Q9H4I0 556 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 IKZF5Q9H5V7 419 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 SLC52A3Q9NQ40 469 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 SLAMF8Q9P0V8 285 aa15.76■□□□□ 0.11
CCDC43-204ENST00000588687 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC43-204ENST00000588687 V9GYY5 206 aaPredicted RBP15.76■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM120BA0PK00 339 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 UBDO15205 165 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 SPRY1O43609 319 aaPredicted RBP15.75■□□□□ 0.11
CCDC43-204ENST00000588687 UBL3O95164 117 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 MAGEB1P43366 347 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM33P57088 247 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 HILS1P60008 231 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 RAB39AQ14964 217 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 HHATQ5VTY9 493 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 USP43Q70EL4 1123 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 PXKQ7Z7A4 578 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 FUNDC1Q8IVP5 155 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 SKA3Q8IX90 412 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 MIER2Q8N344 545 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 PAQR4Q8N4S7 273 aaPredicted RBP15.75■□□□□ 0.11
CCDC43-204ENST00000588687 OR51F2Q8NH61 342 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM54Q969K7 222 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM43Q9BTV4 400 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 ASPNQ9BXN1 380 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 CENPHQ9H3R5 247 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 B3GAT2Q9NPZ5 323 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 SLC7A8Q9UHI5 535 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 POFUT2Q9Y2G5 429 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 GRIP1Q9Y3R0 1128 aa15.75■□□□□ 0.11
CCDC43-204ENST00000588687 IGLV3-9A0A075B6K5 115 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 TMEM89A2RUT3 159 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 C5orf58C9J3I9 102 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 DEAF1O75398 565 aaPredicted RBP15.74■□□□□ 0.11
CCDC43-204ENST00000588687 RAB36O95755 333 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 SERPINA5P05154 406 aa15.74■□□□□ 0.11
CCDC43-204ENST00000588687 PATE4P0C8F1 98 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms