RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LYPD3O95274 346 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 IGFBP1P08833 259 aaPredicted RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 B4GALT1P15291 398 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 GZMKP49863 264 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 PPOXP50336 477 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 RBBP4Q09028 425 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 SNTB2Q13425 540 aaKnown RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 DAG1Q14118 895 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 MSMPQ1L6U9 139 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 TSPYL5Q86VY4 417 aaPredicted RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 PHC2Q8IXK0 858 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 CCDC36Q8IYA8 594 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 CDK20Q8IZL9 346 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 DPP10Q8N608 796 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 OR6N1Q8NGY5 312 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 MSI2Q96DH6 328 aaKnown RBP12.4□□□□□ -0.42
VMP1-206ENST00000587945 LRR1Q96L50 414 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 MAGEB18Q96M61 343 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 ULBP2Q9BZM5 246 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 BPESC1Q9GZL8 116 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 RAB1BQ9H0U4 201 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 CHODLQ9H9P2 273 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 NOX1Q9Y5S8 564 aa12.4□□□□□ -0.42
VMP1-206ENST00000587945 LOC100289279A0A1B0GTE1 492 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 KPNA4O00629 521 aaPredicted RBP12.39□□□□□ -0.43
VMP1-206ENST00000587945 FMO6PO60774 539 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 STAMBPO95630 424 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 CH25HO95992 272 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 IFNGR1P15260 489 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 IGFBP5P24593 272 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 BIDP55957 195 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 NFYCQ13952 458 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 GSG1Q2KHT4 349 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 ENTPD8Q5MY95 495 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
VMP1-206ENST00000587945 ZNF613Q6PF04 617 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 PXKQ7Z7A4 578 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 OR5J2Q8NH18 312 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 TAMM41Q96BW9 452 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 REPIN1Q9BWE0 567 aaKnown RBP12.39□□□□□ -0.43
VMP1-206ENST00000587945 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 HEATR1Q9H583 2144 aaKnown RBP12.39□□□□□ -0.43
VMP1-206ENST00000587945 KAT8Q9H7Z6 458 aaKnown RBP12.39□□□□□ -0.43
VMP1-206ENST00000587945 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 TMEM160Q9NX00 188 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
VMP1-206ENST00000587945 LRP5LA4QPB2 252 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 VSTM5A8MXK1 200 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 HMGB1P1B2RPK0 211 aaPredicted RBP12.38□□□□□ -0.43
VMP1-206ENST00000587945 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
VMP1-206ENST00000587945 CHP2O43745 196 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 MT-ATP6P00846 226 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 ADRA2AP08913 450 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 DAOP14920 347 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 CD247P20963 164 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 GIPRP48546 466 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 PTDSS1P48651 473 aaKnown RBP12.38□□□□□ -0.43
VMP1-206ENST00000587945 CSNK1A1P48729 337 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 ZNF74Q16587 644 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 FAM166AQ6J272 317 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 IL17RDQ8NFM7 739 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 OR10A6Q8NH74 314 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 FGFBP3Q8TAT2 258 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 ADAMTS16Q8TE57 1224 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 FOXB1Q99853 325 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 SOX7Q9BT81 388 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 TPK1Q9H3S4 243 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 DYNLRB1Q9NP97 96 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 MYOZ1Q9NP98 299 aaPredicted RBP12.38□□□□□ -0.43
VMP1-206ENST00000587945 KCNS2Q9ULS6 477 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 SLC7A7Q9UM01 511 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 TRIM33Q9UPN9 1127 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 CMAHPQ9Y471 501 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 RTTNQ86VV8 2226 aa12.38□□□□□ -0.43
VMP1-206ENST00000587945 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 A0A0G2JND7 137 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 LYNX1G3V0Z9 82 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 EDF1O60869 148 aaKnown RBP12.37□□□□□ -0.43
VMP1-206ENST00000587945 OR6A2O95222 327 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 C8BP07358 591 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 LYNX1P0DP58 116 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 ZNF35P13682 527 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 ZNF14P17017 642 aaPredicted RBP12.37□□□□□ -0.43
VMP1-206ENST00000587945 ZNF23P17027 643 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 NR4A1P22736 598 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 PCGF2P35227 344 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 RAB1AP62820 205 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
VMP1-206ENST00000587945 MELKQ14680 651 aa12.37□□□□□ -0.43
VMP1-206ENST00000587945 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms