RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 C16orf52Q8NHV5 167 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 BCL2L10Q9HD36 194 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 NPIPA1Q9UND3 350 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 HRH3Q9Y5N1 445 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 TSC2P49815 1807 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF432O94892 652 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 HCKP08631 526 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 PVALBP20472 110 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 RSPO3Q9BXY4 272 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 AICDAQ9GZX7 198 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 TMEM231Q9H6L2 316 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 TSPAN11A1L157 253 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 EPPINO95925 133 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 NFYAP23511 347 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 MC2RQ01718 297 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 LTBQ06643 244 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 FAM53BQ14153 422 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 SGCAQ16586 387 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 OR52N1Q8NH53 320 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 FCRL1Q96LA6 429 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 LINC00615Q96LM1 132 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 WDR77Q9BQA1 342 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 TEX101Q9BY14 249 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 ACTR6Q9GZN1 396 aa12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 C19orf53Q9UNZ5 99 aaPredicted RBP12.59□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF593O00488 134 aaPredicted RBP12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 PEX14O75381 377 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 HTR3BO95264 441 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 TRAPPC2P0DI81 140 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 TRAPPC2BP0DI82 140 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 AGFG1P52594 562 aaKnown RBP12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 PRSS12P56730 875 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 ACTA2P62736 377 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 ACTG2P63267 376 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 OR7A5Q15622 319 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 COL28A1Q2UY09 1125 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 UNQ6126/PRO20091Q6UXV3 157 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 SLC29A4Q7RTT9 530 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 ZNF687Q8N1G0 1237 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 BEST3Q8N1M1 668 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 OR10AC1Q8NH08 325 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 PELI1Q96FA3 418 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 OR2M2Q96R28 347 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 NT5DC2Q9H857 520 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 WDR76Q9H967 626 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 MEPEQ9NQ76 525 aaPredicted RBP12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 EPHA6Q9UF33 1036 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 SCP2D1Q9UJQ7 156 aa12.58□□□□□ -0.39
CACNA1A-209ENST00000587525 OR6C68A6NDL8 312 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 CYB5AP00167 134 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 ITGA5P08648 1049 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 PSMB1P20618 241 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 CDK2P24941 298 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 LSSP48449 732 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 BLKP51451 505 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 TUSC1Q2TAM9 212 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 NKAPLQ5M9Q1 402 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 PHF19Q5T6S3 580 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 OR2T4Q8NH00 348 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 AIFM2Q9BRQ8 373 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 C20orf85Q9H1P6 137 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 SIGLEC7Q9Y286 467 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 RLN2P04090 185 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 CALCBP10092 127 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 S1PR1P21453 382 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 CCNOP22674 350 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 MTNR1BP49286 362 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 NRG3P56975 720 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 LPAL2Q16609 132 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 RALGAPA2Q2PPJ7 1873 aa12.58□□□□□ -0.4
CACNA1A-209ENST00000587525 LOC105371267A0A1B0GV96 52 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 SERINC4A6NH21 518 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 ATG12O94817 140 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 PI3P19957 117 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 ESPL1Q14674 2120 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 LGALSLQ3ZCW2 172 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 SLC22A10Q63ZE4 541 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 MDGA2Q7Z553 956 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 OR51S1Q8NGJ8 323 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 SLC25A44Q96H78 314 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 KCNG2Q9UJ96 466 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 LSM2Q9Y333 95 aaKnown RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 MN1Q10571 1320 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 hCG_1807616A0A1W2PRN6 198 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 PRAMEF2O60811 474 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 CBX7O95931 251 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 ZGLP1P0C6A0 271 aa12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 TMIGD3P0DMS9 266 aaPredicted RBP12.57□□□□□ -0.4
CACNA1A-209ENST00000587525 SPI1P17947 270 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms