RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NEURL1O76050 574 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 MT-ND5P03915 603 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 CNR1P21554 472 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 SRD5A2P31213 254 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 UGT2B10P36537 528 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 DAP3P51398 398 aaKnown RBP17.82■□□□□ 0.44
TRIM47-204ENST00000587339 HCCSP53701 268 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 HSF1Q00613 529 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 LINC00696Q6ZRV3 163 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 ZFP41Q8N8Y5 198 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 ZNF511Q8NB15 262 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 KBTBD8Q8NFY9 601 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 ZFAND2BQ8WV99 257 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 TMEM203Q969S6 136 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 NUAK2Q9H093 628 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 NPIPA1Q9UND3 350 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 TRAPPC4Q9Y296 219 aa17.82■□□□□ 0.44
TRIM47-204ENST00000587339 PTPRBP23467 1997 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 CUL9Q8IWT3 2517 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 A0A1W2PNV4 684 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 NPIPB13A6NJU9 1138 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 NPIPB4C9JG80 1138 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 IFNGR1P15260 489 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 CELP19835 753 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 CRYBB2P43320 205 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 BDH1Q02338 343 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 DGUOKQ16854 277 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 EEF1A1P5Q5VTE0 462 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 GALNT16Q8N428 558 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 MIB2Q96AX9 1013 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 C4orf36Q96KX1 117 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 SIGLEC12Q96PQ1 595 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 TRIM36Q9NQ86 728 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 SSR3Q9UNL2 185 aa17.81■□□□□ 0.44
TRIM47-204ENST00000587339 A6NIZ1 184 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ARGFXA6NJG6 315 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 LRRC3CA6NJW4 275 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 SULT2B1O00204 365 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 CLPXO76031 633 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 WDPCPO95876 746 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 GABRA5P31644 462 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 RRADP55042 308 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 RAP1BP61224 184 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ACTA2P62736 377 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 RAP1AP62834 184 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ACTG2P63267 376 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 TMPPEQ6ZT21 453 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 SLC35D2Q76EJ3 337 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 SSX6Q7RTT6 188 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ZBTB46Q86UZ6 589 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 RFLNBQ8N5W9 214 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ADPRHL1Q8NDY3 354 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 THAP4Q8WY91 577 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 VSX1Q9NZR4 365 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-204ENST00000587339 FKBP7Q9Y680 259 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 GVINP1Q7Z2Y8 2422 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 J3QLW9 94 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ZNF19P17023 458 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 OR1C1Q15619 314 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 OR14L1PQ8NHC6 308 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ASB10Q8WXI3 467 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 ZFP64Q9NPA5 681 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 B3GAT1Q9P2W7 334 aa17.8■□□□□ 0.44
TRIM47-204ENST00000587339 BOKQ9UMX3 212 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-204ENST00000587339 SF3B6Q9Y3B4 125 aaKnown RBP17.8■□□□□ 0.44
TRIM47-204ENST00000587339 SLC22A23A1A5C7 686 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SLC30A4O14863 429 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 RFPL3SP0C7P2 107 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 CAPZA2P47755 286 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SERPINB10P48595 397 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 OR12D2P58182 307 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 RAC1P63000 192 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SLC35A1P78382 337 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 RUNX1T1Q06455 604 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 TMEM225Q6GV28 225 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SLC16A9Q7RTY1 509 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 YRDCQ86U90 279 aaKnown RBP17.79■□□□□ 0.44
TRIM47-204ENST00000587339 TBC1D15Q8TC07 691 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SNX33Q8WV41 574 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 FAM173AQ9BQD7 235 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 TTTY10Q9BZA0 68 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 MED29Q9NX70 200 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 PLA2G3Q9NZ20 509 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 ZMIZ1Q9ULJ6 1067 aa17.79■□□□□ 0.44
TRIM47-204ENST00000587339 SLC16A7O60669 478 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 PMS2P2O95744 297 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 PRKAR1AP10644 381 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 RPS25P62851 125 aaKnown RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 ROR2Q01974 943 aaKnown RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 AGAP7PQ5VUJ5 663 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 FAM205BPQ63HN1 556 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 VASH1Q7L8A9 365 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 GPAT4Q86UL3 456 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TIGD4Q8IY51 512 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 SLC39A7Q92504 469 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TRMT61AQ96FX7 289 aaKnown RBP17.78■□□□□ 0.44
TRIM47-204ENST00000587339 AGAP4Q96P64 663 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 TM9SF2Q99805 663 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 COPS3Q9UNS2 423 aa17.78■□□□□ 0.44
TRIM47-204ENST00000587339 B9D1Q9UPM9 204 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms