RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 MPDZO75970 2070 aa12.92□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DCTN6O00399 190 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CLDN4O14493 209 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 NDUFB6O95139 128 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IL5P05113 134 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GIPP09681 153 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ASAH2BP0C7U1 165 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SOX2P48431 317 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CTXN1P60606 82 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RAB14P61106 215 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SKP1P63208 163 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HHEXQ03014 270 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CBFBQ13951 182 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FNDC7Q5VTL7 733 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ARMC6Q6NXE6 501 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LRRN1Q6UXK5 716 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MEIOBQ8N635 442 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LRRC20Q8TCA0 184 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HMGB4Q8WW32 186 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CCDC74AQ96AQ1 378 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FKRPQ9H9S5 495 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF69Q9UC07 566 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PPIEQ9UNP9 301 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 PLSCR5A0PG75 271 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SNRPGP15A8MWD9 76 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TXNDC12O95881 172 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF250P15622 560 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MAOAP21397 527 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ADH7P40394 386 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CD226Q15762 336 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZNF542PQ5EBM4 170 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM184AQ6ZMB5 413 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM151BQ8IW70 566 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C10orf53Q8N6V4 93 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GATSQ8NAP1 163 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SRA1Q9HD15 236 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR4C45A6NMZ5 311 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GLSO94925 669 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR2A4O95047 310 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ALDOBP05062 364 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 F13BP05160 661 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMIGD3P0DMS9 266 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GLULP15104 373 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 C4BPBP20851 252 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RABIFP47224 123 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SCAND1P57086 179 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 EGR4Q05215 589 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OPCMLQ14982 345 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 AANATQ16613 207 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 FIP1L1Q6UN15 594 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TAF8Q7Z7C8 310 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TMPRSS12Q86WS5 348 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SLC38A6Q8IZM9 456 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ZSCAN1Q8NBB4 408 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 OR2A7Q96R45 310 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LMF1Q96S06 567 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LPAR4Q99677 370 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 IER2Q9BTL4 223 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SRPX2O60687 465 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CSRP1P21291 193 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 RAP2BP61225 183 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 SKP2Q13309 424 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 CBLN3Q6UW01 205 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 MED25Q71SY5 747 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 HDDC2Q7Z4H3 204 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 ADAMTS18Q8TE60 1221 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 UBQLN4Q9NRR5 601 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 LAMP5Q9UJQ1 280 aa12.9□□□□□ -0.34
CDK5RAP3-237ENST00000585163 TRBV5-7A0A0A0MS05 114 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 A0A1B0GTH9 108 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 A0A1W2PPL8 197 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OR2M5A3KFT3 312 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ANXA2P2A6NMY6 339 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 OIP5O43482 229 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 XRCC3O43542 346 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF254O75437 659 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 SNAPC5O75971 98 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ZNF432O94892 652 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CLPSP04118 112 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ANXA2P07355 339 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 CXCL2P19875 107 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MST1P26927 711 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 ITPKBP27987 946 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 PSMA6P60900 246 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 LTBQ06643 244 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 MFSD13AQ14CX5 517 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 KANSL1Q7Z3B3 1105 aa12.89□□□□□ -0.35
CDK5RAP3-237ENST00000585163 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms