RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 SLITRK2Q9H156 845 aa15.46■□□□□ 0.07
TOP3A-220ENST00000585031 NTN4Q9HB63 628 aa15.46■□□□□ 0.07
TOP3A-220ENST00000585031 ADPRHL2Q9NX46 363 aa15.46■□□□□ 0.07
TOP3A-220ENST00000585031 CORINQ9Y5Q5 1042 aa15.46■□□□□ 0.07
TOP3A-220ENST00000585031 RYR3Q15413 4870 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 GSNP06396 782 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF35P13682 527 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ARR3P36575 388 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 RPL3P39023 403 aaKnown RBP15.45■□□□□ 0.06
TOP3A-220ENST00000585031 MAGEB1P43366 347 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 MRPL19P49406 292 aaKnown RBP15.45■□□□□ 0.06
TOP3A-220ENST00000585031 MVKQ03426 396 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ZP4Q12836 540 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 AGKQ53H12 422 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF311Q5JNZ3 666 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 PHYHD1Q5SRE7 291 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 IL23RQ5VWK5 629 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 OR4F3Q6IEY1 312 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 NANPQ8TBE9 248 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 CADM1Q9BY67 442 aaKnown RBP15.45■□□□□ 0.06
TOP3A-220ENST00000585031 RASSF4Q9H2L5 321 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 MS4A5Q9H3V2 200 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 EFCAB1Q9HAE3 211 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 GPR35Q9HC97 309 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 SLC52A3Q9NQ40 469 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.45■□□□□ 0.06
TOP3A-220ENST00000585031 EXD2Q9NVH0 621 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 ATAD3AQ9NVI7 634 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 SEC14L4Q9UDX3 406 aa15.45■□□□□ 0.06
TOP3A-220ENST00000585031 A0A0G2JMP0 313 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 A0A0X1KG70 313 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 LOC100653049A0A140TA62 436 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 SCN2BO60939 215 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 CIB2O75838 187 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 KRT34O76011 436 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 ANPEPP15144 967 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 SRSF4Q08170 494 aaKnown RBP15.44■□□□□ 0.06
TOP3A-220ENST00000585031 EPS8Q12929 822 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 PGS1Q32NB8 556 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 C6orf136Q5SQH8 315 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 OR4M2Q8NGB6 313 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 POLE3Q9NRF9 147 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 PRDM4Q9UKN5 801 aa15.44■□□□□ 0.06
TOP3A-220ENST00000585031 BBIP1A8MTZ0 92 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 FAAHO00519 579 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 FRS3O43559 492 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 CDC14BO60729 498 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 HLA-HP01893 362 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 CHRM4P08173 479 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 ALDOCP09972 364 aaKnown RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 PRTN3P24158 256 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 SH3BGRP55822 239 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 CLDN17P56750 224 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 MRPS11P82912 194 aaKnown RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 EMX2Q04743 252 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 FXNQ16595 210 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 CEACAM16Q2WEN9 425 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 ALKBH6Q3KRA9 238 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 MMEL1Q495T6 779 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 PDCD4Q53EL6 469 aaKnown RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 BCL6BQ8N143 479 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 NATD1Q8N6N6 113 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 ANKFN1Q8N957 763 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 FNDC5Q8NAU1 212 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 SYT14Q8NB59 555 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 TSPEARQ8WU66 669 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 OIT3Q8WWZ8 545 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 UTP4Q969X6 686 aaKnown RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF48Q96MX3 618 aaPredicted RBP15.43■□□□□ 0.06
TOP3A-220ENST00000585031 SLC38A1Q9H2H9 487 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 AIG1Q9NVV5 245 aa15.43■□□□□ 0.06
TOP3A-220ENST00000585031 DNAJC9-AS1A6NH13 148 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 J3QLI3 93 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 NPIPB7O75200 414 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 IGHV2-5P01817 119 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 GKN3PP0CG01 181 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF14P17017 642 aaPredicted RBP15.42■□□□□ 0.06
TOP3A-220ENST00000585031 PRPS1L1P21108 318 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 FPR2P25090 351 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 GLRXP35754 106 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 NUDT2P50583 147 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 IL13RA1P78552 427 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 RIPK1Q13546 671 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 SYPL1Q16563 259 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 DCAF12L2Q5VW00 463 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 WDFY1Q8IWB7 410 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 PCYOX1LQ8NBM8 494 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 IL17RDQ8NFM7 739 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 RCN3Q96D15 328 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 C7orf69Q9H7B7 122 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 MOV10Q9HCE1 1003 aaKnown RBP15.42■□□□□ 0.06
TOP3A-220ENST00000585031 SDR39U1Q9NRG7 319 aaPredicted RBP15.42■□□□□ 0.06
TOP3A-220ENST00000585031 RLIMQ9NVW2 624 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 ZNF224Q9NZL3 707 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 NOP53Q9NZM5 478 aaKnown RBP15.42■□□□□ 0.06
TOP3A-220ENST00000585031 ZIM2Q9NZV7 527 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 CCDC167Q9P0B6 97 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 B3GAT1Q9P2W7 334 aa15.42■□□□□ 0.06
TOP3A-220ENST00000585031 PRPF19Q9UMS4 504 aaKnown RBP15.42■□□□□ 0.06
TOP3A-220ENST00000585031 AGAP5A6NIR3 686 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms