RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 RNF224P0DH78 156 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SDHAP31040 664 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CDC42P60953 191 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SNAPC1Q16533 368 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC35F1Q5T1Q4 408 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RTL6Q6ICC9 239 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CASP12Q6UXS9 341 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CD163Q86VB7 1156 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 DOLPP1Q86YN1 238 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ARIH2OSQ8N7S6 290 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GALNT11Q8NCW6 608 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF519Q8TB69 540 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ABHD3Q8WU67 409 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TRUB1Q8WWH5 349 aaKnown RBP14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ASB10Q8WXI3 467 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 UBE2FQ969M7 185 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 MUS81Q96NY9 551 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC38A2Q96QD8 506 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 DDOQ99489 341 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 APOL4Q9BPW4 351 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 BCO1Q9HAY6 547 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KLHL9Q9P2J3 617 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 FLVCR1Q9Y5Y0 555 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ESPL1Q14674 2120 aa14.54□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TEX13CA0A0J9YWL9 993 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 FIGNL2A6NMB9 653 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF724A8MTY0 619 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC2A10O95528 541 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 FCGR2AP12318 317 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 HIST1H1CP16403 213 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ACVR2AP27037 513 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 NOS3P29474 1203 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ACVR1BP36896 505 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 DAP3P51398 398 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ISL1P61371 349 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 TOP3AQ13472 1001 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 C1orf185Q5T7R7 199 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RPTNQ6XPR3 784 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 P4HA3Q7Z4N8 544 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 WDFY1Q8IWB7 410 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 DEPDC4Q8N2C3 294 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 OR52E2Q8NGJ4 325 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 OR6X1Q8NH79 312 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF775Q96BV0 537 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 RASD2Q96D21 266 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF385AQ96PM9 386 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ANKRD60Q9BZ19 345 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GP6Q9HCN6 339 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CMC2Q9NRP2 79 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 GLRX2Q9NS18 164 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 MED29Q9NX70 200 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 ZNF226Q9NYT6 803 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 KLHL21Q9UJP4 597 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 HSPE1-MOB4S4R3N1 261 aa14.53□□□□□ -0.08
CDK5RAP3-228ENST00000583363 CACNA1DQ01668 2161 aa14.52□□□□□ -0.08
CDK5RAP3-228ENST00000583363 SLC35F4A4IF30 521 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 A6NIZ1 184 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ZNF726A6NNF4 738 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 GPR171O14626 319 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TLX2O43763 284 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PRKYO43930 277 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SLC19A2O60779 497 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 YES1P07947 543 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MYF6P23409 242 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NTF4P34130 210 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CDKN2AP42771 156 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PCYT1AP49585 367 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 BIDP55957 195 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CLDN17P56750 224 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RAP1BP61224 184 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RAP1AP62834 184 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RUNX1T1Q06455 604 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MELKQ14680 651 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 EEF1A1P5Q5VTE0 462 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FAM205BPQ63HN1 556 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SEM1Q6ZVN7 128 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PTCHD4Q6ZW05 846 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MCEMP1Q8IX19 187 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TUSC5Q8IXB3 177 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TCEANCQ8N8B7 351 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 C9orf106Q8NAJ2 232 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NPEPL1Q8NDH3 523 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SETD9Q8NE22 299 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 OR4K13Q8NH42 304 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RHOXF1Q8NHV9 184 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FAM81AQ8TBF8 368 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SSC4DQ8WTU2 575 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ADAD1Q96M93 576 aaKnown RBP14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 EMC6Q9BV81 110 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PRRG3Q9BZD7 231 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TP63Q9H3D4 680 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 Q9H521 79 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RNF6Q9Y252 685 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FAM215AQ9Y5M1 114 aa14.52□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MBD3L4A6NDZ8 208 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MBD3L3A6NE82 208 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MBD3L5A6NJ08 208 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ARHGEF9O43307 516 aa14.51□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TRMUO75648 421 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms