RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CDK5R2Q13319 367 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 ITGADQ13349 1161 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 KRR1Q13601 381 aaKnown RBP10.69□□□□□ -0.7
CCDC57-216ENST00000582885 SLC35F1Q5T1Q4 408 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 NSUN5P2Q63ZY6 315 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 ZIC4Q8N9L1 334 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 SLC37A3Q8NCC5 494 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 NPEPL1Q8NDH3 523 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 OR52E2Q8NGJ4 325 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 FNDC9Q8TBE3 224 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 FNDC8Q8TC99 324 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 WNT2BQ93097 391 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 UBE2FQ969M7 185 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 RASD2Q96D21 266 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 SLC25A44Q96H78 314 aaPredicted RBP10.69□□□□□ -0.7
CCDC57-216ENST00000582885 IL4I1Q96RQ9 567 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
CCDC57-216ENST00000582885 PRRG4Q9BZD6 226 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 BCO1Q9HAY6 547 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 PNPLA3Q9NST1 481 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 UBAP1Q9NZ09 502 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 EMC3Q9P0I2 261 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 KLHL13Q9P2N7 655 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 ING1Q9UK53 422 aaPredicted RBP10.69□□□□□ -0.7
CCDC57-216ENST00000582885 RCE1Q9Y256 329 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 FLVCR1Q9Y5Y0 555 aa10.69□□□□□ -0.7
CCDC57-216ENST00000582885 FIGNL2A6NMB9 653 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 KDM4EB2RXH2 506 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 PRR23D1E9PI22 279 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 XKRYO14609 159 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 WBP4O75554 376 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 AQP8O94778 261 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 SLC2A10O95528 541 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 PRR23D2P0DMB1 279 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 ACVR2AP27037 513 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 CDKN2AP42771 156 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 SLC25A1P53007 311 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 BIDP55957 195 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 RBPJQ06330 500 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 TOP3AQ13472 1001 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 ACSF3Q4G176 576 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 PRR30Q53SZ7 412 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 MESTQ5EB52 335 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 AADACL4Q5VUY2 407 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 NXNL2Q5VZ03 156 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 GFRALQ6UXV0 394 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 JAZF1Q86VZ6 243 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 OR4K13Q8NH42 304 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 ABHD3Q8WU67 409 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 APH1BQ8WW43 257 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 HDAC2Q92769 488 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 PTP4A1Q93096 173 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 TXNDC15Q96J42 360 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 NR1H4Q96RI1 486 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 KCNK17Q96T54 332 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 TM9SF2Q99805 663 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 ALG12Q9BV10 488 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 MRPL13Q9BYD1 178 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 NMNAT2Q9BZQ4 307 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 HINT3Q9NQE9 182 aaKnown RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 RASSF1Q9NS23 344 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 PLCXD1Q9NUJ7 323 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 CLN6Q9NWW5 311 aa10.68□□□□□ -0.7
CCDC57-216ENST00000582885 VSX1Q9NZR4 365 aaPredicted RBP10.68□□□□□ -0.7
CCDC57-216ENST00000582885 BSNQ9UPA5 3926 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 NCOA6Q14686 2063 aaPredicted RBP10.67□□□□□ -0.7
CCDC57-216ENST00000582885 KMT2BQ9UMN6 2715 aaPredicted RBP10.67□□□□□ -0.7
CCDC57-216ENST00000582885 POLEQ07864 2286 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 PRSS37A4D1T9 235 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 SLC35F4A4IF30 521 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 OR6C68A6NDL8 312 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 SNTNA6NMZ2 147 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 ZNF726A6NNF4 738 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 PRRG2O14669 202 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 PRODHO43272 600 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 ARHGEF9O43307 516 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 TRMUO75648 421 aaKnown RBP10.67□□□□□ -0.7
CCDC57-216ENST00000582885 SERPINI2O75830 405 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 ZNF432O94892 652 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 TGM6O95932 706 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 RENP00797 406 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 TPOP07202 933 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 YES1P07947 543 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 NR2C1P13056 603 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 ABOP16442 354 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 MLLT10P55197 1068 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 CLDN17P56750 224 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 TMED1Q13445 227 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 CRMP1Q14194 572 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 HIST3H3Q16695 136 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
CCDC57-216ENST00000582885 EEF1A1P5Q5VTE0 462 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 OR2A2Q6IF42 318 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 LAIR2Q6ISS4 152 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 LEG1Q6P5S2 330 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 UGT2A3Q6UWM9 527 aa10.67□□□□□ -0.7
CCDC57-216ENST00000582885 CXXC5Q7LFL8 322 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms