RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	CCNG1	P51959	295 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	UCN	P55089	124 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	HERV-K104	P61576	105 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	RPP38	P78345	283 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	DCD	P81605	110 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TGM3	Q08188	693 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CHIT1	Q13231	466 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	BIK	Q13323	160 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	DOC2A	Q14183	400 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	GAMT	Q14353	236 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	EXT1	Q16394	746 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	UNC50	Q53HI1	259 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	LCE1F	Q5T754	118 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	KHDRBS2	Q5VWX1	349 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	FRMPD2B	Q6IN97	320 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PWWP2B	Q6NUJ5	590 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF497	Q6ZNH5	498 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	GPRIN3	Q6ZVF9	776 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ABHD13	Q7L211	337 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	GOLGA7	Q7Z5G4	137 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ADCK1	Q86TW2	530 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZCCHC7	Q8N3Z6	543 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	MARVELD2	Q8N4S9	558 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ARFGAP2	Q8N6H7	521 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CSNK1A1L	Q8N752	337 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF485	Q8NCK3	441 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	OR2L5	Q8NG80	312 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	OR4F6	Q8NGB9	312 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	OR2T11	Q8NH01	316 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TCP10L	Q8TDR4	215 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	AGAP11	Q8TF27	550 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	HPSE2	Q8WWQ2	592 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	N4BP2L2	Q92802	583 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	FGF11	Q92914	225 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	FAM46B	Q96A09	425 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SLCO4A1	Q96BD0	722 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	C11orf24	Q96F05	449 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CMTM7	Q96FZ5	175 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC45A3	Q96JT2	553 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	FCRL1	Q96LA6	429 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	C10orf90	Q96M02	699 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PRAP1	Q96NZ9	151 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	IP6K3	Q96PC2	410 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	FAM111A	Q96PZ2	611 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SERPINI1	Q99574	410 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NRTN	Q99748	197 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PKP2	Q99959	881 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SIKE1	Q9BRV8	207 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CENPK	Q9BS16	269 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ALKBH7	Q9BT30	221 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	URM1	Q9BTM9	101 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TBCD	Q9BTW9	1192 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	MS4A8	Q9BY19	250 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ULBP3	Q9BZM4	244 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	EGLN1	Q9GZT9	426 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	WWTR1	Q9GZV5	400 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	DRC3	Q9H069	523 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	RIMS4	Q9H426	269 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SYNDIG1	Q9H7V2	258 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CHST11	Q9NPF2	352 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	CUTC	Q9NTM9	273 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	INTS9	Q9NV88	658 aa	Known RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	C14orf105	Q9NVL8	296 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF446	Q9NWS9	450 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	MS4A12	Q9NXJ0	267 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	NKIRAS1	Q9NYS0	192 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TMEM181	Q9P2C4	612 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	PISD	Q9UG56	409 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	ZNF490	Q9ULM2	529 aa	Predicted RBP	2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	TMCC3	Q9ULS5	477 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SNX6	Q9UNH7	406 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SHROOM3	Q8TF72	1996 aa		2.69	□□□□□ -1.98
MSI2-215	ENST00000582453	SPTBN4	Q9H254	2564 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	ANKRD36	A6QL64	1941 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453		A0A0J9YVX5	310 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	SRRM4	A7MD48	611 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453		A8MU76	341 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453		C9J4A7	227 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	SLC28A1	O00337	649 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	MANBA	O00462	879 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	UBFD1	O14562	309 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	AZIN1	O14977	448 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	CASC3	O15234	703 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	P2RX6	O15547	441 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	RRP8	O43159	456 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	HCRTR1	O43613	425 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	OR1F1	O43749	312 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	LCMT2	O60294	686 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	KLHL41	O60662	606 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	TBX19	O60806	448 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	SPAG7	O75391	227 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	KHDRBS3	O75525	346 aa	Known RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	CDC123	O75794	336 aa	Predicted RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	DFFB	O76075	338 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	KIAA0754	O94854	1291 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	SUPT7L	O94864	414 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	ATP1B1	P05026	303 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	GPI	P06744	558 aa		2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	KLK3	P07288	261 aa	Predicted RBP	2.68	□□□□□ -1.98
MSI2-215	ENST00000582453	CAPN1	P07384	714 aa		2.68	□□□□□ -1.98

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms