RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMEM203Q969S6 136 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 KCTD7Q96MP8 289 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 OR5B2Q96R09 309 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ALG12Q9BV10 488 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 HCAR1Q9BXC0 346 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ANGPTL4Q9BY76 406 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 OR11A1Q9GZK7 315 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 SLC25A18Q9H1K4 315 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 KCNN2Q9H2S1 579 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 TXNIPQ9H3M7 391 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 CHST11Q9NPF2 352 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ASB6Q9NWX5 421 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 STMN3Q9NZ72 180 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 LSM2Q9Y333 95 aaKnown RBP8.38□□□□□ -1.07
SS18-220ENST00000582092 IGSF10Q6WRI0 2623 aa8.38□□□□□ -1.07
SS18-220ENST00000582092 ATRXP46100 2492 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 A0A1W2PQ72 361 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CCDC182A6NF36 153 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CENPBD1B2RD01 187 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CLDN25C9JDP6 229 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PLPP3O14495 311 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PHYHO14832 338 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TXNDC12O95881 172 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PLGP00747 810 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 SERPINA3P01011 423 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SLC2A5P22732 501 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 F8A1P23610 371 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ITGA3P26006 1051 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CRABP1P29762 137 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 GABRA5P31644 462 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CDKN2AP42771 156 aaKnown RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 RRADP55042 308 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SLC35A1P78382 337 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 LTBQ06643 244 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PUDPQ08623 228 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ACSM1Q08AH1 577 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SELENBP1Q13228 472 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 FHL1Q13642 323 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SSX1Q16384 188 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PLPPR5Q32ZL2 321 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TMEM176BQ3YBM2 270 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ACER2Q5QJU3 275 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ZNF362Q5T0B9 420 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 C1QL3Q5VWW1 255 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 RAET1LQ5VY80 246 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TMEM81Q6P7N7 255 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PCSK4Q6UW60 755 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PAMR1Q6UXH9 720 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 LINC00299Q6ZSB3 139 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SLC16A9Q7RTY1 509 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 KCTD20Q7Z5Y7 419 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 UEVLDQ8IX04 471 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ARIH2OSQ8N7S6 290 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CLEC1AQ8NC01 280 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ZNF417Q8TAU3 575 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TBC1D15Q8TC07 691 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 DYNC2LI1Q8TCX1 351 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 PAQR8Q8TEZ7 354 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 RELTQ969Z4 430 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 C4orf36Q96KX1 117 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 KLHL15Q96M94 604 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 DACH2Q96NX9 599 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TSPAN32Q96QS1 320 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 RBP7Q96R05 134 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ZNF587Q96SQ5 575 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 MNTQ99583 582 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 NAA11Q9BSU3 229 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 CENPOQ9BU64 300 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TMED9Q9BVK6 235 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 SIAEQ9HAT2 523 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ADGRL4Q9HBW9 690 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 ALKBH4Q9NXW9 302 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 TAS2R5Q9NYW4 299 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CCDC59Q9P031 241 aaKnown RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 LAMP5Q9UJQ1 280 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 GNG8Q9UK08 70 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 B3GALT5Q9Y2C3 310 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 RPH3AQ9Y2J0 694 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 PEX16Q9Y5Y5 336 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 MRPS18BQ9Y676 258 aaKnown RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 TMEM14AQ9Y6G1 99 aa8.37□□□□□ -1.07
SS18-220ENST00000582092 CHCHD2Q9Y6H1 151 aaPredicted RBP8.37□□□□□ -1.07
SS18-220ENST00000582092 A0A1W2PQL4 384 aaPredicted RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 ANKRD33BA6NCL7 494 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 OR6C68A6NDL8 312 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 ZNF726A6NNF4 738 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 C17orf51A8MQB3 221 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 FAM171A2A8MVW0 826 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SULT2B1O00204 365 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SNPHO15079 494 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 SEC14L5O43304 696 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 TMCC2O75069 709 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 NPIPB7O75200 414 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 GPX5O75715 221 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 TRAPPC6AO75865 159 aa8.36□□□□□ -1.07
SS18-220ENST00000582092 RGS9O75916 674 aaPredicted RBP8.36□□□□□ -1.07
SS18-220ENST00000582092 KRT8P05787 483 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms