RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 MAGEA2P43356 314 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 YAP1P46937 504 aaKnown RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 PRPS1P60891 318 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MS4A2Q01362 244 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 RPL18Q07020 188 aaKnown RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 LAPTM4AQ15012 233 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 TAF11Q15544 211 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 TBRG1Q3YBR2 411 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 FBXW10Q5XX13 1052 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 LRFN4Q6PJG9 635 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 TBPL2Q6SJ96 375 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF704Q6ZNC4 412 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 C20orf204Q6ZNR8 217 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 GPR137CQ8N3F9 429 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 SLC7A6OSQ96CW6 309 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 RADILQ96JH8 1075 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 ALPK1Q96QP1 1244 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 EMC6Q9BV81 110 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 GRIP2Q9C0E4 1043 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MOV10Q9HCE1 1003 aaKnown RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 B3GNT2Q9NY97 397 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MGAT4BQ9UQ53 548 aa11.05□□□□□ -0.64
SNORD55-201ENST00000581525 MAGED1Q9Y5V3 778 aaPredicted RBP11.05□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF726A6NNF4 738 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 C11orf98E9PRG8 122 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 BLOC1S5-TXNDC5H3BN57 136 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 ACOT8O14734 319 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 HS3ST1O14792 307 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 MGRN1O60291 552 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 PIP5K1CO60331 668 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 KRT33AO76009 404 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 UBOX5O94941 541 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 BCL10O95999 233 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 WNT11O96014 354 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 IGLV1-44P01699 117 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 H1F0P07305 194 aaKnown RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 DANCRP0C864 163 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 PGA4P0DJD7 388 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 PGA3P0DJD8 388 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 IFI30P13284 250 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 DNASE1P24855 282 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 AQP2P41181 271 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 LIMS1P48059 325 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 BIDP55957 195 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 SMIM11AP58511 58 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 ARF1P84077 181 aaKnown RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 MXRA7P84157 204 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 BSPH1Q075Z2 132 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 CEACAM16Q2WEN9 425 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 ARMC4Q5T2S8 1044 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 HMBOX1Q6NT76 420 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 PODNL1Q6PEZ8 512 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 TMEM108Q6UXF1 575 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 NANOGNBQ7Z5D8 188 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 MOSPD2Q8NHP6 518 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 ALKBH3Q96Q83 286 aaPredicted RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 TXNIPQ9H3M7 391 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 CCM2LQ9NUG4 571 aaPredicted RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 BEX4Q9NWD9 120 aaPredicted RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 GLTPQ9NZD2 209 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 RHCGQ9UBD6 479 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 FAM32AQ9Y421 112 aaKnown RBP11.04□□□□□ -0.64
SNORD55-201ENST00000581525 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
SNORD55-201ENST00000581525 ROS1P08922 2347 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF469Q96JG9 3925 aaPredicted RBP11.03□□□□□ -0.64
SNORD55-201ENST00000581525 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 CD3EP07766 207 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 UMPSP11172 480 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 CD40P25942 277 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 OMPP47874 163 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 BNIP1Q12981 228 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 CAMK2DQ13557 499 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 NRN1LQ496H8 165 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
SNORD55-201ENST00000581525 HIKESHIQ53FT3 197 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 KLHL17Q6TDP4 642 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 HDDC2Q7Z4H3 204 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 CDK20Q8IZL9 346 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 LRRC75A-AS1Q8N1F1 130 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ASB10Q8WXI3 467 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 PIGTQ969N2 578 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF566Q969W8 418 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ASB9Q96DX5 294 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF75AQ96N20 296 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 TNFRSF13CQ96RJ3 184 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 ZNF347Q96SE7 839 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 DENND2DQ9H6A0 471 aaPredicted RBP11.03□□□□□ -0.64
SNORD55-201ENST00000581525 MAGIXQ9H6Y5 334 aa11.03□□□□□ -0.64
SNORD55-201ENST00000581525 B3GAT2Q9NPZ5 323 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms