RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 ZNF99A8MXY4 864 aaPredicted RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 NPIPB4C9JG80 1138 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 SAGP10523 405 aaPredicted RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 DAP3P51398 398 aaKnown RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 RPL18Q07020 188 aaKnown RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 CAMK2DQ13557 499 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 LAPTM4AQ15012 233 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 CEACAM16Q2WEN9 425 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 C3orf36Q3SXR2 165 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 TMPRSS11FQ6ZWK6 438 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 TSEN54Q7Z6J9 526 aaKnown RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 OAFQ86UD1 273 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 DHFR2Q86XF0 187 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 ZNF611Q8N823 705 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 FAM169BQ8N8A8 192 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 NRGNQ92686 78 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 ALKBH3Q96Q83 286 aaPredicted RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 HS3ST6Q96QI5 342 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 FOXC2Q99958 501 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 UBTD1Q9HAC8 227 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 BEX4Q9NWD9 120 aaPredicted RBP14.39□□□□□ -0.11
IFT20-210ENST00000580357 GLTPQ9NZD2 209 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 POFUT2Q9Y2G5 429 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 HIF3AQ9Y2N7 669 aa14.39□□□□□ -0.11
IFT20-210ENST00000580357 EFCAB9A8MZ26 197 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 MCIDASD6RGH6 385 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 M0R3G1 203 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 HS3ST1O14792 307 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 GYG2O15488 501 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 MGRN1O60291 552 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 SERPINI2O75830 405 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 ATE1O95260 518 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 IGHG1P01857 330 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 SEMG1P04279 462 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 FABP3P05413 133 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 AQP2P41181 271 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 CSNK1A1P48729 337 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 ARF1P84077 181 aaKnown RBP14.38□□□□□ -0.11
IFT20-210ENST00000580357 VLDLRP98155 873 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 BSPH1Q075Z2 132 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 LGALS3BPQ08380 585 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 TBRG1Q3YBR2 411 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 DNAL1Q4LDG9 190 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 CARD17Q5XLA6 110 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 SEZ6L2Q6UXD5 910 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 LINGO2Q7L985 606 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 NRMQ8IXM6 262 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 TMEM54Q969K7 222 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 DHRS1Q96LJ7 313 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 ALPK1Q96QP1 1244 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 ULBP2Q9BZM5 246 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 PLEKHA6Q9Y2H5 1048 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 CSMD1Q96PZ7 3565 aa14.38□□□□□ -0.11
IFT20-210ENST00000580357 hCG_2039718K7EN88 272 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 CLOCKO15516 846 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 KRT36O76013 467 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 GADD45GO95257 159 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 F13BP05160 661 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 NR2C1P13056 603 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 HOXB6P17509 224 aaKnown RBP14.37□□□□□ -0.11
IFT20-210ENST00000580357 CD53P19397 219 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 MAKP20794 623 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 CD40P25942 277 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 RASSF2P50749 326 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 ZNF83P51522 516 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 TRAP1Q12931 704 aaKnown RBP14.37□□□□□ -0.11
IFT20-210ENST00000580357 IQCCQ4KMZ1 466 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 ALG10Q5BKT4 473 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 PODNL1Q6PEZ8 512 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 TBPL2Q6SJ96 375 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 ZNF627Q7L945 461 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 PIWIL3Q7Z3Z3 882 aaKnown RBP14.37□□□□□ -0.11
IFT20-210ENST00000580357 ZDHHC21Q8IVQ6 265 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 FAM86B1Q8N7N1 296 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 FNDC8Q8TC99 324 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 SLC7A13Q8TCU3 470 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 AKAP1Q92667 903 aaKnown RBP eCLIP14.37□□□□□ -0.11
IFT20-210ENST00000580357 ASB9Q96DX5 294 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 LRGUKQ96M69 825 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 TXNIPQ9H3M7 391 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 DENND2DQ9H6A0 471 aaPredicted RBP14.37□□□□□ -0.11
IFT20-210ENST00000580357 MAGIXQ9H6Y5 334 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 PDZD2O15018 2839 aa14.37□□□□□ -0.11
IFT20-210ENST00000580357 M0R1B8 84 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 PIP5K1CO60331 668 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 ATP5HO75947 161 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 UBOX5O94941 541 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 PLAUP00749 431 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 ACADSP16219 412 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 IFNGR2P38484 337 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 ART1P52961 327 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 CLRN1P58418 232 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 RPS4XP62701 263 aaKnown RBP14.36□□□□□ -0.11
IFT20-210ENST00000580357 DEFB113Q30KQ7 82 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 ZNF672Q499Z4 452 aaPredicted RBP14.36□□□□□ -0.11
IFT20-210ENST00000580357 ZBED5Q49AG3 693 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 HIKESHIQ53FT3 197 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 FGD3Q5JSP0 725 aa14.36□□□□□ -0.11
IFT20-210ENST00000580357 FAM205BPQ63HN1 556 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms