RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CD63P08962 238 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ZNF3P17036 446 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 APEX1P27695 318 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 RPL4P36578 427 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 TPBGQ13641 420 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 EFR3AQ14156 821 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 QPRTQ15274 297 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 P2RY14Q15391 338 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 NTRK2Q16620 822 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 Q5BKY6 102 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 LINC00114Q6XXX2 140 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ACBD7Q8N6N7 88 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 FAM98AQ8NCA5 519 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ATP6V1C2Q8NEY4 427 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 OR5W2Q8NH69 310 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ADAMTS17Q8TE56 1095 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ERMAPQ96PL5 475 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CMC2Q9NRP2 79 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 A0A087WUJ7 227 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 A0A1W2PQD3 144 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 HMX3A6NHT5 357 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CASKO14936 926 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 HPP00738 406 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 GABRA5P31644 462 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 MLF1P58340 268 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 EGR4Q05215 589 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 FAM27D1Q5T7N8 215 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 RTL4Q6ZR62 310 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 C10orf53Q8N6V4 93 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 OR51L1Q8NGJ5 315 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 GPR119Q8TDV5 335 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 PTP4A1Q93096 173 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ZNF426Q9BUY5 554 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ALG8Q9BVK2 526 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SRRQ9GZT4 340 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 EXOGQ9Y2C4 368 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SF3B6Q9Y3B4 125 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CMAHPQ9Y471 501 aa11.47□□□□□ -0.57
CDK5RAP3-217ENST00000580287 A0A075B6Q4 140 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 MEIOCA2RUB1 952 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 TRABD2BA6NFA1 517 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 FABP12A6NFH5 140 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ELOA3DA6NLF2 546 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 TMCC2O75069 709 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SLC6A6P31641 620 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SSR4P51571 173 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 P2RX1P51575 399 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 CTBP2P56545 445 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ELOA3BQ3SY89 546 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ACER2Q5QJU3 275 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 DCAF10Q5QP82 559 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ZNF322Q6U7Q0 402 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ATG4DQ86TL0 474 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 SDR9C7Q8NEX9 313 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 ELOA3Q8NG57 546 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 OR52E2Q8NGJ4 325 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 OR4K13Q8NH42 304 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 KTI12Q96EK9 354 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 GNRHR2Q96P88 292 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 FN3KQ9H479 309 aa11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 EXOSC3Q9NQT5 275 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-217ENST00000580287 A0A1W2PQ72 361 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ERVH48-1M5A8F1 160 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MAGEB4O15481 346 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HPGDSO60760 199 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IGHA1P01876 353 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 CSF3P09919 207 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 HK1P19367 917 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IL11P20809 199 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 ITGA3P26006 1051 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 GPR85P60893 370 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 YIF1BQ5BJH7 314 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 BEST3Q8N1M1 668 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 WDSUB1Q8N9V3 476 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 TEAD3Q99594 435 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 OR11A1Q9GZK7 315 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 C11orf54Q9H0W9 315 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PLA2G3Q9NZ20 509 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 STMN3Q9NZ72 180 aa11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SIRT4Q9Y6E7 314 aaPredicted RBP11.46□□□□□ -0.58
CDK5RAP3-217ENST00000580287 A0A0G2JMM0 328 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 A0A1W2PPB8 328 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 A0A1W2PRS3 328 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SLC22A31A6NKX4 558 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 KIR3DP1A8MWS1 328 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PTP4A3O75365 173 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 IL1AP01583 271 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SERPINA7P05543 415 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 NAGAP17050 411 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 RBM34P42696 430 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 C17orf67Q0P5P2 114 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 PYDC2Q56P42 97 aa11.45□□□□□ -0.58
CDK5RAP3-217ENST00000580287 SPINK14Q6IE38 97 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms