RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 VPS33AQ96AX1 596 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 JMJD8Q96S16 334 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 ZNF385DQ9H6B1 395 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 HIF1ANQ9NWT6 349 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 SEC14L4Q9UDX3 406 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 DUSP13Q9UII6 198 aa15.41■□□□□ 0.06
MKS1-209ENST00000580127 PPIHO43447 177 aaKnown RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 TRAF3IP2O43734 574 aaPredicted RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 SNNO75324 88 aaPredicted RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 SEC14L2O76054 403 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 MSMBP08118 114 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 BMP2P12643 396 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 ZNF14P17017 642 aaPredicted RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 STX1BP61266 288 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 PUDPQ08623 228 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 CAMK2DQ13557 499 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 MOGQ16653 247 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 GLIPR1L2Q4G1C9 344 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 DHRS4L2Q6PKH6 230 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 GTF2H4Q92759 462 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 MAL2Q969L2 176 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 ZMYND19Q96E35 227 aaPredicted RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 SLC41A3Q96GZ6 507 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 MAELQ96JY0 434 aaKnown RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 SYT3Q9BQG1 590 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 EMC6Q9BV81 110 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 MRPL39Q9NYK5 338 aaKnown RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 NKIRAS1Q9NYS0 192 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 KLHL14Q9P2G3 628 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 TESQ9UGI8 421 aaKnown RBP15.4■□□□□ 0.06
MKS1-209ENST00000580127 SLC7A8Q9UHI5 535 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 CORO2BQ9UQ03 480 aa15.4■□□□□ 0.06
MKS1-209ENST00000580127 TRAV20A0A0B4J274 112 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 A0A1W2PPW3 197 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 ZNF503-AS2A6NEH8 195 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 FARS2O95363 451 aaKnown RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 PTHP01270 115 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 TCN1P20061 433 aaPredicted RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 SLC6A2P23975 617 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 COL8A2P25067 703 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 CFPP27918 469 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 GIPRP48546 466 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 RGS8P57771 180 aaPredicted RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 ACTG1P63261 375 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 MYBPC1Q00872 1141 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 TEKQ02763 1124 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 NKPD1Q17RQ9 610 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 GTDC1Q4AE62 458 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 ELFN2Q5R3F8 820 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 GCNT6Q5T4J0 391 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 FAHD2BQ6P2I3 314 aaPredicted RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 TMEM154Q6P9G4 183 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 DPPA2Q7Z7J5 298 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 RANBP3LQ86VV4 465 aaPredicted RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 C3orf56Q8N813 242 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 CLDND2Q8NHS1 167 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 GCDHQ92947 438 aaPredicted RBP15.39■□□□□ 0.05
MKS1-209ENST00000580127 FAHD2AQ96GK7 314 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 MS4A3Q96HJ5 214 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 FOXB1Q99853 325 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 LRMDAQ9H2I8 198 aa15.39■□□□□ 0.05
MKS1-209ENST00000580127 EVPLLA8MZ36 301 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 TRIM77I1YAP6 450 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 MT-ATP6P00846 226 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 MT-ND5P03915 603 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 SERPINA5P05154 406 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 NUDT7P0C024 238 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 OR8G3PP0DMU2 310 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 B4GALT1P15291 398 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 ALDH3B1P43353 468 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 CSNK1A1P48729 337 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 AQP5P55064 265 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 CDK6Q00534 326 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 PCGF3Q3KNV8 242 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 TNFAIP8L3Q5GJ75 292 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 SWT1Q5T5J6 900 aaKnown RBP15.38■□□□□ 0.05
MKS1-209ENST00000580127 LSRQ86X29 649 aaPredicted RBP15.38■□□□□ 0.05
MKS1-209ENST00000580127 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.38■□□□□ 0.05
MKS1-209ENST00000580127 SNX33Q8WV41 574 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 TXNDC15Q96J42 360 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 LRRC37BQ96QE4 947 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 PAIP1Q9H074 479 aaKnown RBP15.38■□□□□ 0.05
MKS1-209ENST00000580127 C1orf198Q9H425 327 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 NARFLQ9H6Q4 476 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 MED29Q9NX70 200 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 SLCO1C1Q9NYB5 712 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 TREM2Q9NZC2 230 aa15.38■□□□□ 0.05
MKS1-209ENST00000580127 IGKV1D-42A0A075B6H8 117 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 TMEM120BA0PK00 339 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 PLPP3O14495 311 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 HPRP00739 348 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 HPXP02790 462 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 IGFBP1P08833 259 aaPredicted RBP15.37■□□□□ 0.05
MKS1-209ENST00000580127 ADORA3P0DMS8 318 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 HLA-DOBP13765 273 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 HTR2AP28223 471 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 SLC18A1P54219 525 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 OR1Q1Q15612 314 aa15.37■□□□□ 0.05
MKS1-209ENST00000580127 FXNQ16595 210 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms