RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 NDUFB2O95178 105 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 CD14P08571 375 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 CCKARP32238 428 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 BIDP55957 195 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 CTXN1P60606 82 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 LGALS3BPQ08380 585 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 ITGADQ13349 1161 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 RFX4Q33E94 735 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 SHQ1Q6PI26 577 aaKnown RBP20.04■□□□□ 0.8
NDEL1-207ENST00000580012 THSD4Q6ZMP0 1018 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 LINGO2Q7L985 606 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 CXorf67Q86X51 503 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-207ENST00000580012 ASB10Q8WXI3 467 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 LRTOMTQ8WZ04 291 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 SLC25A44Q96H78 314 aaPredicted RBP20.04■□□□□ 0.8
NDEL1-207ENST00000580012 FEVQ99581 238 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 MRPL13Q9BYD1 178 aaKnown RBP20.04■□□□□ 0.8
NDEL1-207ENST00000580012 NRIP3Q9NQ35 241 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 CACNA1CQ13936 2221 aa20.04■□□□□ 0.8
NDEL1-207ENST00000580012 NBPF19A0A087WUL8 3843 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 CENPBD1B2RD01 187 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 MCIDASD6RGH6 385 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 DAP3P51398 398 aaKnown RBP20.03■□□□□ 0.8
NDEL1-207ENST00000580012 FOXG1P55316 489 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-207ENST00000580012 RUNX1T1Q06455 604 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 FAPQ12884 760 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 HMBOX1Q6NT76 420 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 SMARCD3Q6STE5 483 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 UBE2J2Q8N2K1 259 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 ZNF433Q8N7K0 673 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-207ENST00000580012 TMEM54Q969K7 222 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 BOD1Q96IK1 185 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 BDH2Q9BUT1 245 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 PDP1Q9P0J1 537 aaPredicted RBP20.03■□□□□ 0.8
NDEL1-207ENST00000580012 UPB1Q9UBR1 384 aa20.03■□□□□ 0.8
NDEL1-207ENST00000580012 ZNF346Q9UL40 294 aaKnown RBP20.03■□□□□ 0.8
NDEL1-207ENST00000580012 E2F6O75461 281 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 ITGA5P08648 1049 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 COL8A1P27658 744 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 MPGP29372 298 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 RPL27P61353 136 aaKnown RBP20.02■□□□□ 0.8
NDEL1-207ENST00000580012 COX10Q12887 443 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 CAMK2DQ13557 499 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 HIST3H3Q16695 136 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 PHYHD1Q5SRE7 291 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 DPY19L2P2Q6ZN68 376 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 ZNF620Q6ZNG0 422 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 RASSF6Q6ZTQ3 369 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 FAM122BQ7Z309 247 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 AMIGO2Q86SJ2 522 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 IGFN1Q86VF2 1251 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 HS3ST5Q8IZT8 346 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 CLDN22Q8N7P3 220 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 OR5K1Q8NHB7 308 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 ZNF519Q8TB69 540 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 CENPNQ96H22 339 aaPredicted RBP20.02■□□□□ 0.8
NDEL1-207ENST00000580012 MUS81Q96NY9 551 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 S100A14Q9HCY8 104 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 TAS2R16Q9NYV7 291 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 IL20Q9NYY1 176 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 MAGED1Q9Y5V3 778 aaPredicted RBP20.02■□□□□ 0.8
NDEL1-207ENST00000580012 FREM1Q5H8C1 2179 aa20.02■□□□□ 0.8
NDEL1-207ENST00000580012 CENPEQ02224 2701 aa20.02■□□□□ 0.79
NDEL1-207ENST00000580012 ANKRD65E5RJM6 399 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 TP53P04637 393 aaPredicted RBP20.01■□□□□ 0.79
NDEL1-207ENST00000580012 PGA4P0DJD7 388 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 PGA3P0DJD8 388 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 APEHP13798 732 aaKnown RBP20.01■□□□□ 0.79
NDEL1-207ENST00000580012 ACADSP16219 412 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 GSTM3P21266 225 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 PRKACGP22612 351 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 ERVK-25P63136 954 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 MELKQ14680 651 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 LRFN4Q6PJG9 635 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 C22orf34Q6ZV56 151 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 HDDC2Q7Z4H3 204 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 ARIH2OSQ8N7S6 290 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 STEAP2Q8NFT2 490 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 NMD3Q96D46 503 aaKnown RBP20.01■□□□□ 0.79
NDEL1-207ENST00000580012 TSPAN32Q96QS1 320 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 NIPSNAP1Q9BPW8 284 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 USB1Q9BQ65 265 aaKnown RBP20.01■□□□□ 0.79
NDEL1-207ENST00000580012 KATNB1Q9BVA0 655 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 OR52D1Q9H346 318 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 GPR35Q9HC97 309 aa20.01■□□□□ 0.79
NDEL1-207ENST00000580012 STX18Q9P2W9 335 aaKnown RBP20.01■□□□□ 0.79
NDEL1-207ENST00000580012 TRMUO75648 421 aaKnown RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 TXNDC12O95881 172 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 ANXA8P13928 327 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 RPL4P36578 427 aaKnown RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 ARHGDIAP52565 204 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 ZNF133P52736 654 aaPredicted RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 SNTB1Q13884 538 aaKnown RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 STK11Q15831 433 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 CARD17Q5XLA6 110 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 FAM205BPQ63HN1 556 aa20■□□□□ 0.79
NDEL1-207ENST00000580012 MEX3BQ6ZN04 569 aaKnown RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 ABHD12BQ7Z5M8 362 aaPredicted RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 KISS1RQ969F8 398 aaPredicted RBP20■□□□□ 0.79
NDEL1-207ENST00000580012 ZNF566Q969W8 418 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms