RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 WDFY1Q8IWB7 410 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 C20orf196Q8IYI0 205 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 LINC00471Q8N535 108 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 LRRC75AQ8NAA5 344 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 OR6N1Q8NGY5 312 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 GNPDA2Q8TDQ7 276 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 SLCO4A1Q96BD0 722 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 ZC3HAV1LQ96H79 300 aaKnown RBP13.55□□□□□ -0.24
IFT20-208ENST00000578985 LRR1Q96L50 414 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 NDEL1Q9GZM8 345 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 MCCC2Q9HCC0 563 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 U3KQV3 271 aa13.55□□□□□ -0.24
IFT20-208ENST00000578985 GNGT2O14610 69 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 PTP4A3O75365 173 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 RAD51DO75771 328 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 CSNK1A1P48729 337 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 PRPS1P60891 318 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 ROR2Q01974 943 aaKnown RBP13.54□□□□□ -0.24
IFT20-208ENST00000578985 TGFBR3Q03167 851 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 DAZAP2Q15038 168 aaPredicted RBP13.54□□□□□ -0.24
IFT20-208ENST00000578985 TAF11Q15544 211 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 ACKR1Q16570 336 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 C1orf94Q6P1W5 598 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 PGBD2Q6P3X8 592 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 C22orf34Q6ZV56 151 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 HDDC2Q7Z4H3 204 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 YTHDF3Q7Z739 585 aaKnown RBP13.54□□□□□ -0.24
IFT20-208ENST00000578985 IGFN1Q86VF2 1251 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 C14orf79Q96F83 325 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
IFT20-208ENST00000578985 GPA33Q99795 319 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 TXNIPQ9H3M7 391 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 GPR35Q9HC97 309 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 B3GAT2Q9NPZ5 323 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 ZNF226Q9NYT6 803 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 SIGLEC7Q9Y286 467 aa13.54□□□□□ -0.24
IFT20-208ENST00000578985 NPIPB13A6NJU9 1138 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 RPL36A-HNRNPH2H7BZ11 118 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 M0R3G1 203 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 NDUFB2O95178 105 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 THBDP07204 575 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 ZNF26P17031 533 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 FPR3P25089 353 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 SSTR2P30874 369 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 RPL4P36578 427 aaKnown RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 GSSP48637 474 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 GABPB1Q06547 395 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 TOP3AQ13472 1001 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 GK3PQ14409 553 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 STK11Q15831 433 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 GABRA6Q16445 453 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 MICAQ29983 383 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 PHYHD1Q5SRE7 291 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 ARMC4Q5T2S8 1044 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 OR7E24Q6IFN5 339 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 P2RY8Q86VZ1 359 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 WFDC8Q8IUA0 241 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 C1orf162Q8NEQ5 155 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 OR9Q2Q8NGE9 314 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 HSD17B8Q92506 261 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 ZNF566Q969W8 418 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 SLC25A44Q96H78 314 aaPredicted RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 STX18Q9P2W9 335 aaKnown RBP13.53□□□□□ -0.24
IFT20-208ENST00000578985 DNAJB9Q9UBS3 223 aa13.53□□□□□ -0.24
IFT20-208ENST00000578985 OR5H1A6NKK0 313 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 A6NNC1 897 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 TIPRLO75663 272 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 IGHG1P01857 330 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 IGHMP01871 453 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 CD14P08571 375 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 PRF1P14222 555 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 ACADSP16219 412 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 CRYGSP22914 178 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 IST1P53990 364 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 CLRN1P58418 232 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 RPL27P61353 136 aaKnown RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 ERVK-25P63136 954 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 ARF1P84077 181 aaKnown RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 TLE4Q04727 773 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 TSPAN31Q12999 210 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 TAB1Q15750 504 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 CEACAM16Q2WEN9 425 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 ZNF770Q6IQ21 691 aaPredicted RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 ALKBH2Q6NS38 261 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 GIPC3Q8TF64 312 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 DUS3LQ96G46 650 aaKnown RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 RAB3IPQ96QF0 476 aaPredicted RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
IFT20-208ENST00000578985 POLDIP3Q9BY77 421 aaKnown RBP13.52□□□□□ -0.25
IFT20-208ENST00000578985 ULBP2Q9BZM5 246 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms