RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SLC39A1Q9NY26 324 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 PLCL2Q9UPR0 1127 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 PRRC2CQ9Y520 2896 aaKnown RBP12.46□□□□□ -0.41
NDEL1-204ENST00000578172 TMEM150CB9EJG8 249 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 GPR171O14626 319 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 UBL3O95164 117 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 CFDP00746 253 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-204ENST00000578172 PRKXP51817 358 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 FAM69BQ5VUD6 431 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 KCTD9Q7L273 389 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 OR5M1Q8NGP8 315 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 ANKRD9Q96BM1 317 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-204ENST00000578172 SMIM19Q96E16 107 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 MESP1Q9BRJ9 268 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 TRPV4Q9HBA0 871 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 HPF1Q9NWY4 346 aa12.46□□□□□ -0.41
NDEL1-204ENST00000578172 MPZL1O95297 269 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 RENP00797 406 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 SLC2A1P11166 492 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 GPR143P51810 404 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 ART1P52961 327 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 EXOSC2Q13868 293 aaKnown RBP12.46□□□□□ -0.42
NDEL1-204ENST00000578172 NPSR1Q6W5P4 371 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.46□□□□□ -0.42
NDEL1-204ENST00000578172 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 MED11Q9P086 117 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.42
NDEL1-204ENST00000578172 CYR61O00622 381 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 RGS13O14921 159 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 RBBP9O75884 186 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 CAPZA2P47755 286 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 DNASE1L1P49184 302 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ACTA2P62736 377 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ACTG2P63267 376 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ADAM8P78325 824 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 LTBQ06643 244 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 TOMM20Q15388 145 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 C19orf47Q8N9M1 422 aaKnown RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 NXPE2Q96DL1 559 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 OR1F2PQ96R84 312 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 GPN1Q9HCN4 374 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ZNF223Q9UK11 482 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 TGFBR3LH3BV60 316 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 OR2T7P0C7T2 308 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 PSMD4P55036 377 aaKnown RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 LAMTOR1Q6IAA8 161 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ZCCHC12Q6PEW1 402 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 FAM198BQ6UWH4 519 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 BPHLQ86WA6 291 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ACBD4Q8NC06 268 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 OR2T27Q8NH04 317 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 NR4A3Q92570 626 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 MRPL48Q96GC5 212 aaKnown RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 MCOLN1Q9GZU1 580 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 COPZ2Q9P299 210 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ZNF281Q9Y2X9 895 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 GPR89AB7ZAQ6 455 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 PLPP2O43688 288 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 THBS1P07996 1170 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 GPR89BP0CG08 455 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 UBL4AP11441 157 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 ITGA3P26006 1051 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 EFNB1P98172 346 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 RNF113BQ8IZP6 322 aaKnown RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 RELL2Q8NC24 303 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 KIAA1143Q96AT1 154 aaPredicted RBP12.45□□□□□ -0.42
NDEL1-204ENST00000578172 PGLYRP3Q96LB9 341 aa12.45□□□□□ -0.42
NDEL1-204ENST00000578172 CPED1A4D0V7 1026 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 PRAMEF2O60811 474 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
NDEL1-204ENST00000578172 PSMB1P20618 241 aaKnown RBP12.44□□□□□ -0.42
NDEL1-204ENST00000578172 IL32P24001 234 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 CSNK1EP49674 416 aaKnown RBP12.44□□□□□ -0.42
NDEL1-204ENST00000578172 RAB38P57729 211 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 RPL18Q07020 188 aaKnown RBP12.44□□□□□ -0.42
NDEL1-204ENST00000578172 EDARQ9UNE0 448 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 TRAV8-7A0A075B6U6 113 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 C13orf42A0A1B0GVH6 325 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 PRR32B1ATL7 298 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 H0YIG0 161 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 PEX14O75381 377 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 ATP1B1P05026 303 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 SLC35E2P0CK97 266 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 GABRG2P18507 467 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 ENPP1P22413 925 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 PLCXD2Q0VAA5 305 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 RPL13AP3Q6NVV1 102 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 CD200R1LQ6Q8B3 271 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 SLC22A18ASQ8N1D0 253 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 OR4D10Q8NGI6 311 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 AMELYQ99218 206 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 ANKRD19PQ9H560 264 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 ATPIF1Q9UII2 106 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 IFITM5A6NNB3 132 aa12.44□□□□□ -0.42
NDEL1-204ENST00000578172 TACSTD2P09758 323 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms