RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 FAM168AQ92567 244 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF75AQ96N20 296 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 PCDHAC1Q9H158 963 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 MEPEQ9NQ76 525 aaPredicted RBP11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 B3GNT2Q9NY97 397 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 NOX1Q9Y5S8 564 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 PMF1-BGLAPU3KQ54 211 aa11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 FBN1P35555 2871 aaKnown RBP11.77□□□□□ -0.53
CUEDC1-204ENST00000577497 LOC100653049A0A140TA62 436 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 KRT34O76011 436 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 F12P00748 615 aaPredicted RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 TP53P04637 393 aaPredicted RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 TROVE2P10155 538 aaKnown RBP eCLIP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 THBS4P35443 961 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 SNRPD2P62316 118 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 PIGFQ07326 219 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 MELKQ14680 651 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 INTS11Q5TA45 600 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 TTC33Q6PID6 262 aaPredicted RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF813Q6ZN06 617 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 SLC46A3Q7Z3Q1 461 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 CARM1Q86X55 608 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 NUP37Q8NFH4 326 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 OR6N1Q8NGY5 312 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 LRR1Q96L50 414 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF583Q96ND8 569 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 MDFIQ99750 246 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 ULBP2Q9BZM5 246 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 PLK3Q9H4B4 646 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 YAE1D1Q9NRH1 226 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 ARMCX1Q9P291 453 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 GMPR2Q9P2T1 348 aaKnown RBP11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 SH3GLB1Q9Y371 365 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 ABCA1O95477 2261 aa11.76□□□□□ -0.53
CUEDC1-204ENST00000577497 SVEP1Q4LDE5 3571 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 PDE5AO76074 875 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 VIMP08670 466 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 IGFBP1P08833 259 aaPredicted RBP11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ASAH2BP0C7U1 165 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 CD79AP11912 226 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 BMP4P12644 408 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 FUT4P22083 530 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ARR3P36575 388 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 OR1E2P47887 323 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 CSNK1A1P48729 337 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 UGT2B15P54855 530 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 DSCR9P59020 149 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 LOXL1Q08397 574 aaPredicted RBP11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 EFNB3Q15768 340 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 MSMPQ1L6U9 139 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 MMEL1Q495T6 779 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 COQ5Q5HYK3 327 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 KRT80Q6KB66 452 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 DEF8Q6ZN54 512 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF627Q7L945 461 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 NKAIN4Q8IVV8 208 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 SVOPLQ8N434 492 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 PFN4Q8NHR9 129 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 FGFBP3Q8TAT2 258 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 TMEM255BQ8WV15 326 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 C10orf82Q8WW14 230 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 TMEM54Q969K7 222 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 TNFRSF13CQ96RJ3 184 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 FOXB1Q99853 325 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 VRK1Q99986 396 aaPredicted RBP11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ECSITQ9BQ95 431 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 NANSQ9NR45 359 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 C20orf141Q9NUB4 165 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF229Q9UJW7 825 aa11.75□□□□□ -0.53
CUEDC1-204ENST00000577497 CHD3Q12873 2000 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 B9A039 149 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 RNF13O43567 381 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 TLX2O43763 284 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 OR6A2O95222 327 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 PATE4P0C8F1 98 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 UMPSP11172 480 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 SLC25A16P16260 332 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 ZNF14P17017 642 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 PAX7P23759 505 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 PTDSS1P48651 473 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 RUNX1T1Q06455 604 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 ZP4Q12836 540 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 SNTB2Q13425 540 aaKnown RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 PIN1Q13526 163 aaPredicted RBP11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 GSG1Q2KHT4 349 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 C6orf52Q5T4I8 152 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 CDK20Q8IZL9 346 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 POU5F2Q8N7G0 328 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 OR6X1Q8NH79 312 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 RASSF5Q8WWW0 418 aa11.74□□□□□ -0.53
CUEDC1-204ENST00000577497 PROX1Q92786 737 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms