RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TREM2Q9NZC2 230 aa1.77□□□□□ -2.13
COPS3-213ENST00000577210 TBC1D24Q9ULP9 559 aa1.77□□□□□ -2.13
COPS3-213ENST00000577210 RPL36Q9Y3U8 105 aaKnown RBP1.77□□□□□ -2.13
COPS3-213ENST00000577210 USP47Q96K76 1375 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 IGHV3OR16-13A0A075B7E8 117 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 RBMY1BA6NDE4 496 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 RBMY1EA6NEQ0 496 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 A6NIZ1 184 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 LRRIQ3A6PVS8 624 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 L7N2F9 121 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 GOSR2O14653 212 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 CASC3O15234 703 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 KRT14P02533 472 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 RBMY1DP0C7P1 496 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 RBMY1A1P0DJD3 496 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 MYL2P10916 166 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 HPGDP15428 266 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 CD1EP15812 388 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 ZNF19P17023 458 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 NPR2P20594 1047 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 CXCR2P25025 360 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 SHMT2P34897 504 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 BTCP35070 178 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 HSD17B2P37059 387 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 TNNT2P45379 298 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 TMED10P49755 219 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 BCAP31P51572 246 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 CRYBB1P53674 252 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 NUP107P57740 925 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 RAP1BP61224 184 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 NDPQ00604 133 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 IRF8Q02556 426 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 MPPED2Q15777 294 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 IL17AQ16552 155 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 PARP15Q460N3 678 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 HIKESHIQ53FT3 197 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 PPM1LQ5SGD2 360 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 TIGD3Q6B0B8 471 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 TWF2Q6IBS0 349 aaKnown RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 RNF165Q6ZSG1 346 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 PEX26Q7Z412 305 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 FAM220AQ7Z4H9 259 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 MICU2Q8IYU8 434 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 CEND1Q8N111 149 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 COMMD1Q8N668 190 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 FNDC5Q8NAU1 212 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 OR7G2Q8NG99 324 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 BLOC1S5Q8TDH9 187 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 PYROXD1Q8WU10 500 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 C7orf33Q8WU49 177 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 ZNF707Q96C28 371 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 MED8Q96G25 268 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 TMEM101Q96IK0 257 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 FAM210BQ96KR6 192 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 HSFY1Q96LI6 401 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 ZNF578Q96N58 590 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 NRTNQ99748 197 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 RARRES2Q99969 163 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 HES7Q9BYE0 225 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 OR51M1Q9H341 326 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 AUNIPQ9H7T9 357 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 FGF20Q9NP95 211 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 IL26Q9NPH9 171 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 PXMP2Q9NR77 195 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 C20orf96Q9NUD7 363 aaPredicted RBP1.76□□□□□ -2.13
COPS3-213ENST00000577210 AHSPQ9NZD4 102 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 V9GY05 133 aa1.76□□□□□ -2.13
COPS3-213ENST00000577210 MSH6P52701 1360 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TRAV25A0A0B4J276 109 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 A0A0J9YXY3 114 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TRBV11-1A0A0K0K1C0 115 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 A0A1B0GUA9 196 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 WI2-2373I1.2A0A1W2PRP0 233 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 FAM231BA6NCW3 169 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 OR2F2O95006 317 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TSPAN13O95857 204 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 TIMP1P01033 207 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 PNMA6AP0CW24 399 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 EIF2S2P20042 333 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 AZU1P20160 251 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 BCKDHBP21953 392 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 HTR1EP28566 365 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 HMOX2P30519 316 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 RBMXP38159 391 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 NAA10P41227 235 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 NAMPTP43490 491 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SLC11A1P49279 550 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ARRB1P49407 418 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 CSNK1EP49674 416 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 MNAT1P51948 309 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 EIF3EP60228 445 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 SELENOTP62341 195 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 IRX3P78415 501 aaPredicted RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 MRPS22P82650 360 aaKnown RBP1.75□□□□□ -2.13
COPS3-213ENST00000577210 LIPEQ05469 1076 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 ECH1Q13011 328 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 SELENBP1Q13228 472 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 GNMTQ14749 295 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 DGUOKQ16854 277 aa1.75□□□□□ -2.13
COPS3-213ENST00000577210 KLHL40Q2TBA0 621 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms