RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 A0A1B0GTH9 108 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 SERINC4A6NH21 518 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 CD14P08571 375 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 GLP1RP43220 463 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 CLDN6P56747 220 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 PCBP3P57721 371 aaKnown RBP16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 THSD4Q6ZMP0 1018 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 TRAPPC6BQ86SZ2 158 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 ZBP1Q9H171 429 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 BIN3Q9NQY0 253 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 UBQLN4Q9NRR5 601 aa16.44■□□□□ 0.22
ATPAF1-214ENST00000576409 TMEM235A6NFC5 223 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 GABARAPH6UMI1 98 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 DEFB133Q30KQ1 61 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 Q6ZTK2 550 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 P4HA3Q7Z4N8 544 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF440Q8IYI8 595 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 OR4N2Q8NGD1 307 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 GOT1L1Q8NHS2 421 aaPredicted RBP16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 HIST1H2AAQ96QV6 131 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 RBM24Q9BX46 236 aaKnown RBP16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 BCL2L10Q9HD36 194 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 PPP4R1LQ9P1A2 415 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 REV1Q9UBZ9 1251 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC22A13Q9Y226 551 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 ABCA3Q99758 1704 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 ARPC4-TTLL3A0A0A6YYG9 625 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 A0A0J9YY10 115 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 VSTM2BA6NLU5 285 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 LANCL1O43813 399 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 TIGD3Q6B0B8 471 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 PXT1Q8NFP0 134 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 FAM3CQ92520 227 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 IL23AQ9NPF7 189 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 BORCS7-ASMTA0A0B4J1R7 106 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 IFITM5A6NNB3 132 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 CD3DP04234 171 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 PET100P0DJ07 73 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 ACHEP22303 614 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 HTR2CP28335 458 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 STK11Q15831 433 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 MEX3BQ6ZN04 569 aaKnown RBP16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 OR5T1Q8NG75 326 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 OR1J4Q8NGS1 313 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC22A8Q8TCC7 542 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 DIO2Q92813 273 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 WFDC6Q9BQY6 131 aa16.43■□□□□ 0.22
ATPAF1-214ENST00000576409 H3BUI4 141 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 P2RY10O00398 339 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 SEC14L5O43304 696 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 HEXBP07686 556 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 CDK5Q00535 292 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 YIF1BQ5BJH7 314 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF547Q8IVP9 402 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 MN1Q10571 1320 aaPredicted RBP16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF264O43296 627 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 CDK5R1Q15078 307 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 AANATQ16613 207 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 WBP2NLQ6ICG8 309 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 RASGRP3Q8IV61 690 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF679Q8IYX0 411 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 OR6M1Q8NGM8 313 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 WDR89Q96FK6 387 aaPredicted RBP16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 WDFY2Q96P53 400 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 MYADMQ96S97 322 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF768Q9H5H4 540 aaKnown RBP16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 IL20Q9NYY1 176 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 HIF3AQ9Y2N7 669 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 OR5K4A6NMS3 321 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 TPT1P13693 172 aaKnown RBP16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 GABRR1P24046 479 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZXDCQ2QGD7 858 aaPredicted RBP16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 CAMKMTQ7Z624 323 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC38A6Q8IZM9 456 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ZNF442Q9H7R0 627 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC25A19Q9HC21 320 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC6A20Q9NP91 592 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 ICKQ9UPZ9 632 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 RNF215Q9Y6U7 377 aa16.42■□□□□ 0.22
ATPAF1-214ENST00000576409 SGCEO43556 437 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 TIMP1P01033 207 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SPI1P17947 270 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 FGF9P31371 208 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 EBPQ15125 230 aaKnown RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 EOGTQ5NDL2 527 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SLAMF9Q96A28 289 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC41A2Q96JW4 573 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 PRRT1Q99946 306 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 FBRSQ9HAH7 460 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 POU3F3P20264 500 aaPredicted RBP16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 TM4SF4P48230 202 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 HNF4GQ14541 408 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SMUG1Q53HV7 270 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 ADAMTSL4Q6UY14 1074 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SLC51BQ86UW2 128 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 MARVELD1Q9BSK0 173 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 SFXN1Q9H9B4 322 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 CACNA1EQ15878 2313 aa16.41■□□□□ 0.22
ATPAF1-214ENST00000576409 FBLP22087 321 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms