RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HRASLS5Q96KN8 279 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ALKBH3Q96Q83 286 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 FEVQ99581 238 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 GPA33Q99795 319 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TMEM43Q9BTV4 400 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TAPBPLQ9BX59 468 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 DGCR6LQ9BY27 220 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 RBM38Q9H0Z9 239 aaKnown RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 ANKRD19PQ9H560 264 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 EVA1AQ9H8M9 152 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 NMNAT1Q9HAN9 279 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 C12orf10Q9HB07 376 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CHST11Q9NPF2 352 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TIGARQ9NQ88 270 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 MED29Q9NX70 200 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 SELENONQ9NZV5 590 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 KLHL9Q9P2J3 617 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 EMC9Q9Y3B6 208 aa6.99□□□□□ -1.29
CCDC40-215ENST00000576033 KLF2Q9Y5W3 355 aaPredicted RBP6.99□□□□□ -1.29
CCDC40-215ENST00000576033 TEX15Q9BXT5 2789 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SMIM31A0A1B0GVY4 71 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 A0A1W2PPR1 153 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SH3PXD2BA1X283 911 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 PLPP3O14495 311 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 IMPA2O14732 288 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 UPK3AO75631 287 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 OR7A10O76100 309 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CCNB2O95067 398 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 IL18BPO95998 194 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CLPTM1O96005 669 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 F13BP05160 661 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 THBDP07204 575 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 H1F0P07305 194 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 YES1P07947 543 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CCDC159P0C7I6 412 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CD8BP10966 210 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 IFI30P13284 250 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 POU2F1P14859 743 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 IGHV1-2P23083 117 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CRHBPP24387 322 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 GTF2E2P29084 291 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 EPHA2P29317 976 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 AQP2P41181 271 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 OR3A2P47893 321 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CLK1P49759 484 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SLC16A1P53985 500 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NR1H2P55055 460 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CLDN17P56750 224 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SMIM11AP58511 58 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 GABARAPL2P60520 117 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CXCR4P61073 352 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 POU3F1Q03052 451 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 RUNX1T1Q06455 604 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NPRL3Q12980 569 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 FHL1Q13642 323 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 RBM48Q5RL73 367 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 TMEM201Q5SNT2 666 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 C6orf141Q5SZD1 244 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NIPAL3Q6P499 406 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 CREB3L2Q70SY1 520 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF295-AS1Q8N0V1 137 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ACBD4Q8NC06 268 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SETD9Q8NE22 299 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 TSPAN14Q8NG11 270 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 PIGXQ8TBF5 258 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SLC7A13Q8TCU3 470 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NRGNQ92686 78 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 MARVELD3Q96A59 401 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ZHX1-C8orf76Q96EF9 292 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF837Q96EG3 531 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ZFP3Q96NJ6 502 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ALPK1Q96QP1 1244 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SIGLEC11Q96RL6 698 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NIPSNAP1Q9BPW8 284 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 POLR2J2Q9GZM3 115 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ENKD1Q9H0I2 346 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 POLR2J3Q9H1A7 115 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 PAPOLBQ9NRJ5 636 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 SLC7A10Q9NS82 523 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 KRT84Q9NSB2 600 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 PAQR5Q9NXK6 330 aaPredicted RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 TAS2R5Q9NYW4 299 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 REV1Q9UBZ9 1251 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 IL20RAQ9UHF4 553 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 TRAPPC4Q9Y296 219 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 POFUT2Q9Y2G5 429 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 NOSIPQ9Y314 301 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 FAM32AQ9Y421 112 aaKnown RBP6.98□□□□□ -1.29
CCDC40-215ENST00000576033 ORC6Q9Y5N6 252 aa6.98□□□□□ -1.29
CCDC40-215ENST00000576033 A0A087WXM4 84 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ZNF724A8MTY0 619 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 H7C1C5 153 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 MSTNO14793 375 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 MAST4O15021 2626 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 RAD51DO75771 328 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 TP53P04637 393 aaPredicted RBP6.97□□□□□ -1.29
CCDC40-215ENST00000576033 CRHP06850 196 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 ITGA5P08648 1049 aa6.97□□□□□ -1.29
CCDC40-215ENST00000576033 IGFBP1P08833 259 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms