RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 RIBC2Q9H4K1 309 aa2.45□□□□□ -2.02
CDC27-216ENST00000574304 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
CDC27-216ENST00000574304 BFARQ9NZS9 450 aa2.45□□□□□ -2.02
CDC27-216ENST00000574304 MARCOQ9UEW3 520 aaPredicted RBP2.45□□□□□ -2.02
CDC27-216ENST00000574304 GGA2Q9UJY4 613 aa2.45□□□□□ -2.02
CDC27-216ENST00000574304 PACSIN2Q9UNF0 486 aaPredicted RBP2.45□□□□□ -2.02
CDC27-216ENST00000574304 KCNIP3Q9Y2W7 256 aa2.45□□□□□ -2.02
CDC27-216ENST00000574304 IGLV3-22A0A075B6J6 115 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 ARPC3O15145 178 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 B3GALNT1O75752 331 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 DCNP07585 359 aaKnown RBP2.44□□□□□ -2.02
CDC27-216ENST00000574304 CELP19835 753 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 CCR1P32246 355 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 NCBP2P52298 156 aaKnown RBP eCLIP2.44□□□□□ -2.02
CDC27-216ENST00000574304 KLHL38Q2WGJ6 581 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 VAX1Q5SQQ9 334 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 ZNF880Q6PDB4 577 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 LINC00173Q6ZV60 143 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 ECHDC2Q86YB7 292 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 ZNF679Q8IYX0 411 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 MYOCDQ8IZQ8 938 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 OR10G4Q8NGN3 311 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 OR2T34Q8NGX1 318 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 PYROXD1Q8WU10 500 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 GEMIN6Q8WXD5 167 aaKnown RBP2.44□□□□□ -2.02
CDC27-216ENST00000574304 RMI2Q96E14 147 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 TSSK3Q96PN8 268 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 GABARAPL3Q9BY60 117 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 YY1AP1Q9H869 796 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 SMOXQ9NWM0 555 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 HPF1Q9NWY4 346 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 TMOD2Q9NZR1 351 aa2.44□□□□□ -2.02
CDC27-216ENST00000574304 PCM1Q15154 2024 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 C7orf66A4D0T2 115 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 TOM1O60784 492 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 UPK3AO75631 287 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 SCGNO76038 276 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 RCBTB2O95199 551 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 PRPS2P11908 318 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 TCN1P20061 433 aaPredicted RBP2.43□□□□□ -2.02
CDC27-216ENST00000574304 OPRD1P41143 372 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 ACAA2P42765 397 aaKnown RBP2.43□□□□□ -2.02
CDC27-216ENST00000574304 SLC7A9P82251 487 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 KLHL30Q0D2K2 578 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 SFT2D3Q587I9 215 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 SHISA6Q6ZSJ9 500 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 NUDCD3Q8IVD9 361 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 MFSD9Q8NBP5 474 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 SDR42E1Q8WUS8 393 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 DTNBP1Q96EV8 351 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 PDXPQ96GD0 296 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 C16orf45Q96MC5 204 aaPredicted RBP2.43□□□□□ -2.02
CDC27-216ENST00000574304 WFIKKN1Q96NZ8 548 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 SLC38A2Q96QD8 506 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 RAB33BQ9H082 229 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 LINC00597Q9H2U6 94 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 LIN28AQ9H9Z2 209 aaKnown RBP2.43□□□□□ -2.02
CDC27-216ENST00000574304 UGT1A7Q9HAW7 530 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 UGT1A10Q9HAW8 530 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 UGT1A8Q9HAW9 530 aa2.43□□□□□ -2.02
CDC27-216ENST00000574304 IGKV1D-13A0A0B4J2D9 117 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 A0A1B0GVI7 797 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 CIB4A0PJX0 185 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 H0YHG0 523 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 VAMP5O95183 116 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 GAPDHP04406 335 aaKnown RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 ADRA2AP08913 450 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 IQCF3P0C7M6 154 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 IGKV1-13P0DP09 117 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 SOX6P35712 828 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 GPR6P46095 362 aaPredicted RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 NPBWR2P48146 333 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 CYB561P49447 251 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 DUSP3P51452 185 aaPredicted RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 CCR8P51685 355 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.02
CDC27-216ENST00000574304 POLR2FP61218 127 aaKnown RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 RPS21P63220 83 aaKnown RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 COX19Q49B96 90 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 FILIP1LQ4L180 1135 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 OR4F3Q6IEY1 312 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 STRADAQ7RTN6 431 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 NEGR1Q7Z3B1 354 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 MREGQ8N565 214 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 ZNF461Q8TAF7 563 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 EMG1Q92979 244 aaKnown RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 SGK3Q96BR1 496 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 RBM14Q96PK6 669 aaKnown RBP2.42□□□□□ -2.02
CDC27-216ENST00000574304 CHAC1Q9BUX1 264 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 ADAP2Q9NPF8 381 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 ZNF355PQ9NSJ1 428 aa2.42□□□□□ -2.02
CDC27-216ENST00000574304 DOCK9Q9BZ29 2069 aa2.41□□□□□ -2.02
CDC27-216ENST00000574304 MSH6P52701 1360 aa2.41□□□□□ -2.02
CDC27-216ENST00000574304 CEMIPQ8WUJ3 1361 aa2.41□□□□□ -2.02
CDC27-216ENST00000574304 K7EQM0 130 aa2.41□□□□□ -2.02
CDC27-216ENST00000574304 MGRN1O60291 552 aa2.41□□□□□ -2.02
CDC27-216ENST00000574304 SRP72O76094 671 aaKnown RBP2.41□□□□□ -2.02
CDC27-216ENST00000574304 HSPA5P11021 654 aaKnown RBP2.41□□□□□ -2.02
CDC27-216ENST00000574304 SLC2A5P22732 501 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms