RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 AHCYL1O43865 530 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 RAMP1O60894 148 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 STSP08842 583 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 CPN1P15169 458 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 KLK2P20151 261 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SLC2A5P22732 501 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 MELKQ14680 651 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SLC35D3Q5M8T2 416 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SIAH3Q8IW03 269 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SPARTQ8N0X7 666 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 GHDCQ8N2G8 530 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 OR9Q1Q8NGQ5 310 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 LGALS12Q96DT0 336 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 TMEM80Q96HE8 168 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 TXNDC15Q96J42 360 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 TAAR6Q96RI8 345 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SIGLEC11Q96RL6 698 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 UCN2Q96RP3 112 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 TIMP4Q99727 224 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SF3B5Q9BWJ5 86 aaKnown RBP12.22□□□□□ -0.45
CCDC40-209ENST00000573474 HAO2Q9NYQ3 351 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 VSX1Q9NZR4 365 aaPredicted RBP12.22□□□□□ -0.45
CCDC40-209ENST00000573474 SPRR3Q9UBC9 169 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 TUBD1Q9UJT1 453 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 FREM3P0C091 2139 aa12.22□□□□□ -0.45
CCDC40-209ENST00000573474 NCOR2Q9Y618 2525 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 TNRC6AQ8NDV7 1962 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 FRYQ5TBA9 3013 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 NPIPA2E9PIF3 369 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 NPIPA3F8WFD2 350 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 TRAF3IP2O43734 574 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 SYNGR4O95473 234 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 CRYABP02511 175 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 MT-ND2P03891 347 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 CLUP10909 449 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 SPI1P17947 270 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 RPL5P46777 297 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 SLC16A1P53985 500 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 NR1H2P55055 460 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 BIDP55957 195 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 RPS7P62081 194 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 SLC17A1Q14916 467 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 PON3Q15166 354 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 LINC00303Q3SY05 128 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 LCN1P1Q5VSP4 162 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 KCTD8Q6ZWB6 473 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 CREB3L2Q70SY1 520 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 CHMP1BQ7LBR1 199 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 SVOPQ8N4V2 548 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 OR9K2Q8NGE7 335 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 OR52I1Q8NGK6 324 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 OR2T4Q8NH00 348 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 OR6X1Q8NH79 312 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 C9orf43Q8TAL5 461 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 ZPLD1Q8TCW7 415 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 WDYHV1Q96HA8 205 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 ADAD1Q96M93 576 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 ARHGAP9Q9BRR9 750 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 TSPAN10Q9H1Z9 355 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 VCX3AQ9NNX9 186 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 FGF20Q9NP95 211 aaPredicted RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 RPRD1BQ9NQG5 326 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 BATF3Q9NR55 127 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 ASB6Q9NWX5 421 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 MED29Q9NX70 200 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 KLHL13Q9P2N7 655 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 MOKQ9UQ07 419 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 EXOGQ9Y2C4 368 aaKnown RBP12.21□□□□□ -0.45
CCDC40-209ENST00000573474 PCDHGB1Q9Y5G3 927 aa12.21□□□□□ -0.45
CCDC40-209ENST00000573474 MED12Q93074 2177 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 SLC22A23A1A5C7 686 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 ZNF726A6NNF4 738 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 H7C1C5 153 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 AQP7O14520 342 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 CYTIPO60759 359 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 TRMUO75648 421 aaKnown RBP12.2□□□□□ -0.46
CCDC40-209ENST00000573474 GLCEO94923 617 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 RAB36O95755 333 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 FADS2O95864 444 aaKnown RBP12.2□□□□□ -0.46
CCDC40-209ENST00000573474 TFAP2AP05549 437 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 GYPBP06028 91 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 DCKP27707 260 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 C21orf33P30042 268 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-209ENST00000573474 GSTT1P30711 240 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 ATP6V1E1P36543 226 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 LCN6P62502 163 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 RUNX1T1Q06455 604 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 EEF1A1P5Q5VTE0 462 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 RNLSQ5VYX0 342 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 GTF2IRD2BQ6EKJ0 949 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 ABLIM2Q6H8Q1 611 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 FCRLAQ7L513 359 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 GTF2IRD2Q86UP8 949 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 PM20D2Q8IYS1 436 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
CCDC40-209ENST00000573474 ROBO4Q8WZ75 1007 aa12.2□□□□□ -0.46
CCDC40-209ENST00000573474 KISS1RQ969F8 398 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms