RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 FAM58BPP0C7Q3 252 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 ZCCHC18P0CG32 403 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 RALBP11234 206 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 CBLP22681 906 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 PRKACBP22694 351 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 JAK1P23458 1154 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 MPZP25189 248 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 PRDX6P30041 224 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SLC6A6P31641 620 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 CEACAM8P31997 349 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-214ENST00000572365 ACTR3P61158 418 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 DYNLT1P63172 113 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 S100A12P80511 92 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SIX1Q15475 284 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SLC1A5Q15758 541 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 PDK4Q16654 411 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 TRIM16LQ309B1 348 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 C6orf136Q5SQH8 315 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 METTL21CQ5VZV1 264 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 DUPD1Q68J44 220 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 IDO2Q6ZQW0 420 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SLC22A16Q86VW1 577 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 PIANPQ8IYJ0 282 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 OR8H3Q8N146 312 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 UBL4BQ8N7F7 174 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 OR2L3Q8NG85 312 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 RNF128Q8TEB7 428 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 GRK7Q8WTQ7 553 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 TADA1Q96BN2 335 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 CMTM5Q96DZ9 223 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 NRBF2Q96F24 287 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 C17orf77Q96MU5 243 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SERPINI1Q99574 410 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 CPNE1Q99829 537 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 DHRS9Q9BPW9 319 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 FICDQ9BVA6 458 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 YTHDF1Q9BYJ9 559 aaKnown RBP4.66□□□□□ -1.66
SF3B3-214ENST00000572365 RHBGQ9H310 441 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 C14orf105Q9NVL8 296 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 TAS2R1Q9NYW7 299 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 C19orf25Q9UFG5 118 aaPredicted RBP4.66□□□□□ -1.66
SF3B3-214ENST00000572365 SLC6A5Q9Y345 797 aa4.66□□□□□ -1.66
SF3B3-214ENST00000572365 IGHV4-30-2A0A087WSY4 118 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 C15orf38-AP3S2A0A0A6YYH1 394 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 IGKV1-8A0A0C4DH67 115 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 LOC285095A0A1B0GVY8 99 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 A0A1W2PPI3 338 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 A0A1W2PPV9 198 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PLSCR5A0PG75 271 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SLC5A10A0PJK1 596 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 MAGEB16A2A368 324 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SMIM23A6NLE4 172 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 AP3B1O00203 1094 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 UBFD1O14562 309 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 BET1O15155 118 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 EDF1O60869 148 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ENTPD5O75356 428 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 GLSO94925 669 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 KLHL2O95198 593 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ACSL3O95573 720 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 CRYZL1O95825 349 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 IGHV2-70P01814 119 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 IGHV4-39P01824 125 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 IGHG3P01860 377 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ABHD2P08910 425 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 CCL3P10147 92 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ACP2P11117 423 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 CTRB1P17538 263 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 TCEA1P23193 301 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PPP2R1BP30154 601 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 IFNA8P32881 189 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SOX3P41225 446 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SLCO1A2P46721 670 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SLC25A11Q02978 314 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 SQLEQ14534 574 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF846Q147U1 533 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PHKG1Q16816 387 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 FBXL19-AS1Q494R0 122 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 ACSF3Q4G176 576 aaPredicted RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 FAM120AOSQ5T036 256 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 LIPNQ5VXI9 398 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 CTRB2Q6GPI1 263 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 MFSD12Q6NUT3 480 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PET117Q6UWS5 81 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 C4orf22Q6V702 233 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PEX26Q7Z412 305 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 GPR141Q7Z602 305 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 DHDDSQ86SQ9 333 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 TMPRSS11BQ86T26 416 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 COMMD2Q86X83 199 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PSTKQ8IV42 348 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 KLHL7Q8IXQ5 586 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 GCNT2Q8N0V5 402 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 TMCO5AQ8N6Q1 288 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 C9orf106Q8NAJ2 232 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 OR2A1Q8NGT9 310 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 OR2L8Q8NGY9 312 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 PNPT1Q8TCS8 783 aaKnown RBP4.65□□□□□ -1.67
SF3B3-214ENST00000572365 LKAAEAR1Q8TD35 194 aa4.65□□□□□ -1.67
SF3B3-214ENST00000572365 DTX3LQ8TDB6 740 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms