RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 SSX4O60224 188 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 EIF1BO60739 113 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 LYPD3O95274 346 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 IMPDH2P12268 514 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 NQO1P15559 274 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 EGR4Q05215 589 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 FAM69AQ5T7M9 428 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 AGAP6Q5VW22 663 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 LINC00114Q6XXX2 140 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 WDR88Q6ZMY6 472 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 SSX8Q7RTT4 187 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 PIWIL3Q7Z3Z3 882 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 P2RY8Q86VZ1 359 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF433Q8N7K0 673 aaPredicted RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 OR52J3Q8NH60 311 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 MFSD8Q8NHS3 518 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
NPLOC4-207ENST00000572346 PRSS27Q9BQR3 290 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 MED31Q9Y3C7 131 aa13□□□□□ -0.33
NPLOC4-207ENST00000572346 IGHV4-30-2A0A087WSY4 118 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 LIPT2A6NK58 231 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 RNF212BA8MTL3 300 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 GNGT2O14610 69 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 GPRIN2O60269 458 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 NPIPB7O75200 414 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 RAD51DO75771 328 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 GADD45GO95257 159 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 IFNA2P01563 188 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 CBLP22681 906 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 RRM2P31350 389 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 MFSD13AQ14CX5 517 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 FBXW9Q5XUX1 488 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 ABLIM2Q6H8Q1 611 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 C10orf67Q8IYJ2 551 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 TAAR8Q969N4 342 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 RHNO1Q9BSD3 238 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 CHID1Q9BWS9 393 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 ASPNQ9BXN1 380 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 ANKRD19PQ9H560 264 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 TMCC3Q9ULS5 477 aa12.99□□□□□ -0.33
NPLOC4-207ENST00000572346 YLPM1P49750 1951 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 IGKV3D-15A0A087WSY6 115 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 A0A096LNT2 108 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 ZNF716A6NP11 495 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 A8MV72 311 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 E7EQL1 145 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 FKBP6O75344 327 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 KRT36O76013 467 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PRSS23O95084 383 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 AKR7A3O95154 331 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 CH25HO95992 272 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 IGHV3-9P01782 118 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 HIST1H2ABP04908 130 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 IFI30P13284 250 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 TTKP33981 857 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 MAGEA2P43356 314 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 NUDT6P53370 316 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 UGT2B15P54855 530 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 IL1RL1Q01638 556 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 SPOCK1Q08629 439 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PDK3Q15120 406 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 CHRFAM7AQ494W8 412 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 IQCCQ4KMZ1 466 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 OTUD3Q5T2D3 398 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 TMEM225Q6GV28 225 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 C11orf71Q6IPW1 123 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 TMEM108Q6UXF1 575 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 HIST3H2AQ7L7L0 130 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PHC2Q8IXK0 858 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 OR10H5Q8NGA6 315 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 OR6S1Q8NH40 331 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 OR52N5Q8NH56 324 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 ACOT11Q8WXI4 607 aaPredicted RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 HIST1H2ACQ93077 130 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 ADAD1Q96M93 576 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 PTDSS2Q9BVG9 487 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 CACNG6Q9BXT2 260 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 REEP1Q9H902 201 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 EMC3Q9P0I2 261 aa12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 NOSIPQ9Y314 301 aaKnown RBP12.98□□□□□ -0.33
NPLOC4-207ENST00000572346 A0A1W2PRQ8 180 aa12.97□□□□□ -0.33
NPLOC4-207ENST00000572346 CIB4A0PJX0 185 aa12.97□□□□□ -0.33
NPLOC4-207ENST00000572346 TNFRSF11BO00300 401 aa12.97□□□□□ -0.33
NPLOC4-207ENST00000572346 OR6A2O95222 327 aa12.97□□□□□ -0.33
NPLOC4-207ENST00000572346 MT-ATP6P00846 226 aa12.97□□□□□ -0.33
NPLOC4-207ENST00000572346 CST1P01037 141 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms