RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 ZNF74Q16587 644 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 LRRC23Q53EV4 343 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-202ENST00000571346 CGB2Q6NT52 195 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 NANOGNBQ7Z5D8 188 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 TSPYL5Q86VY4 417 aaPredicted RBP11.85□□□□□ -0.51
PRPF8-202ENST00000571346 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 OR4F15Q8NGB8 312 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 OR8J3Q8NGG0 315 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 NANOS1Q8WY41 292 aaKnown RBP11.85□□□□□ -0.51
PRPF8-202ENST00000571346 LRRC58Q96CX6 371 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 SH3GL1Q99961 368 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 NANSQ9NR45 359 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 MRGBPQ9NV56 204 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 SH3GLB1Q9Y371 365 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 ABCA1O95477 2261 aa11.85□□□□□ -0.51
PRPF8-202ENST00000571346 CHD3Q12873 2000 aaKnown RBP11.84□□□□□ -0.51
PRPF8-202ENST00000571346 ALPK2Q86TB3 2170 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 IGHV2OR16-5A0A0B4J2B6 119 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 KIAA1324LA8MWY0 1029 aaPredicted RBP11.84□□□□□ -0.51
PRPF8-202ENST00000571346 B9A039 149 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 SHOX2O60902 331 aaPredicted RBP11.84□□□□□ -0.51
PRPF8-202ENST00000571346 PDE5AO76074 875 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 CBR1P16152 277 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 CRYBA2P53672 197 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 TAS2R41P59536 307 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 GUCY1A3Q02108 690 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 ADIPOQQ15848 244 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 SWI5Q1ZZU3 235 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 GSG1Q2KHT4 349 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 COQ5Q5HYK3 327 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 KRT80Q6KB66 452 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 CARM1Q86X55 608 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 SVOPLQ8N434 492 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 FAM169BQ8N8A8 192 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 NUP37Q8NFH4 326 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 OR10H5Q8NGA6 315 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 C10orf105Q8TEF2 133 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 PIMREGQ9BSJ6 248 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 NOX3Q9HBY0 568 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 ZNF229Q9UJW7 825 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 CAPN7Q9Y6W3 813 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 ARFGEF3Q5TH69 2177 aa11.84□□□□□ -0.51
PRPF8-202ENST00000571346 A0A096LNT2 108 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 hCG_2039718K7EN88 272 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 TLX2O43763 284 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-202ENST00000571346 CRLF1O75462 422 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 LYPD3O95274 346 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 RAB36O95755 333 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 HIST1H2ABP04908 130 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
PRPF8-202ENST00000571346 THBS4P35443 961 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 PTDSS1P48651 473 aaKnown RBP11.83□□□□□ -0.52
PRPF8-202ENST00000571346 PDLIM4P50479 330 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 GZMMP51124 257 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 PIGFQ07326 219 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 DAG1Q14118 895 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 GGTLC2Q14390 218 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 MST1LQ2TV78 715 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 HSP90B2PQ58FF3 399 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 LINC00114Q6XXX2 140 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 SLC35D2Q76EJ3 337 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 HIST3H2AQ7L7L0 130 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 SPATA21Q7Z572 469 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 LRRC17Q8N6Y2 441 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 PCYOX1LQ8NBM8 494 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 HIST1H2ACQ93077 130 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 MS4A3Q96HJ5 214 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 MPP4Q96JB8 637 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 LRR1Q96L50 414 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 FOXB1Q99853 325 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 PCDHAC1Q9H158 963 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 DYNLRB1Q9NP97 96 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 SAR1AQ9NR31 198 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 ADAM21Q9UKJ8 722 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 BAG5Q9UL15 447 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 SVEP1Q4LDE5 3571 aa11.83□□□□□ -0.52
PRPF8-202ENST00000571346 LOC100653049A0A140TA62 436 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 A8MV72 311 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-202ENST00000571346 MCIDASD6RGH6 385 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 KRT34O76011 436 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 F12P00748 615 aaPredicted RBP11.82□□□□□ -0.52
PRPF8-202ENST00000571346 NPR2P20594 1047 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 GIPRP48546 466 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 PPOXP50336 477 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 HGFACQ04756 655 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 EFNB3Q15768 340 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 C6orf52Q5T4I8 152 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 ERICH5Q6P6B1 374 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 CCDC80Q76M96 950 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 CALHM3Q86XJ0 350 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 PFN4Q8NHR9 129 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 ZNF566Q969W8 418 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 TNFRSF13CQ96RJ3 184 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 ZNF426Q9BUY5 554 aa11.82□□□□□ -0.52
PRPF8-202ENST00000571346 SLC19A3Q9BZV2 496 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms