RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CNBD2Q96M20 576 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 TSPAN32Q96QS1 320 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 PITX2Q99697 317 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 B3GAT2Q9NPZ5 323 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 GLRX2Q9NS18 164 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 FAM118AQ9NWS6 357 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ASB6Q9NWX5 421 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 MED29Q9NX70 200 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 TVP23BQ9NYZ1 205 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CLCF1Q9UBD9 225 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 RCE1Q9Y256 329 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 NOSIPQ9Y314 301 aaKnown RBP5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ADAM18Q9Y3Q7 739 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 IER3IP1Q9Y5U9 82 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 CELSR3Q9NYQ7 3312 aa5.87□□□□□ -1.47
CTDNEP1-204ENST00000570484 ACACAQ13085 2346 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CD8B2A6NJW9 211 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF814B7Z6K7 855 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PRR23D1E9PI22 279 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 M0R129 80 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 BHLHE40O14503 412 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 IMPA2O14732 288 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ARPC3O15145 178 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC16A6O15403 523 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNHIT1O43257 154 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ARHGEF9O43307 516 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TRAF3IP2O43734 574 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SS18L1O75177 396 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PTP4A3O75365 173 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 MRPL33O75394 65 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SMNDC1O75940 238 aaKnown RBP eCLIP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 AQP8O94778 261 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 IGFBP1P08833 259 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PRR23D2P0DMB1 279 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 HLA-DOBP13765 273 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 KLK2P20151 261 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 GIPRP48546 466 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CSNK1A1P48729 337 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PCYT1AP49585 367 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC16A1P53985 500 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 FXYD6P3P58550 94 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SIRPAP78324 504 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 H3F3AP84243 136 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 LGALS3BPQ08380 585 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 MED21Q13503 144 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 SLC17A1Q14916 467 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PDK3Q15120 406 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 MESTQ5EB52 335 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 LCN1P1Q5VSP4 162 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM236Q5W0B7 351 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CARD17Q5XLA6 110 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 C12orf73Q69YU5 71 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 NIPAL3Q6P499 406 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 LEG1Q6P5S2 330 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 C3P1Q6ZMU1 363 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 Q6ZPB1 254 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 C8orf86Q6ZUL3 223 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PTCHD4Q6ZW05 846 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CXXC5Q7LFL8 322 aaKnown RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 AAED1Q7RTV5 226 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ABHD12BQ7Z5M8 362 aaPredicted RBP5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 GID4Q8IVV7 300 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF100Q8IYN0 542 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 GCNT2Q8N0V5 402 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 UBE2J2Q8N2K1 259 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 KDM8Q8N371 416 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 GPR137CQ8N3F9 429 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CNEP1R1Q8N9A8 125 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PROKR2Q8NFJ6 384 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR52E2Q8NGJ4 325 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR8J1Q8NGP2 316 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR4Q3Q8NH05 313 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 OR4K13Q8NH42 304 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TMEM163Q8TC26 289 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 FNDC8Q8TC99 324 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ASB10Q8WXI3 467 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 RFKQ969G6 155 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZNF566Q969W8 418 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 APH1AQ96BI3 265 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 HRASLS5Q96KN8 279 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 Q96M85 177 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 Q96MT0 163 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ZFP3Q96NJ6 502 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ALG12Q9BV10 488 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ANKRD60Q9BZ19 345 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 ULBP2Q9BZM5 246 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TXNIPQ9H3M7 391 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 FN3KQ9H479 309 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 RERGLQ9H628 205 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CALHM2Q9HA72 323 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 GP6Q9HCN6 339 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 FANCFQ9NPI8 374 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 NRIP3Q9NQ35 241 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 CMC2Q9NRP2 79 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 RASSF1Q9NS23 344 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 PARPBPQ9NWS1 579 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 TAS2R5Q9NYW4 299 aa5.86□□□□□ -1.47
CTDNEP1-204ENST00000570484 H2AFY2Q9P0M6 372 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms