RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ATRXP46100 2492 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FAM183AA6NL82 134 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 PRR23D1E9PI22 279 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 ARHGEF9O43307 516 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 PRR23D2P0DMB1 279 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 GABRB1P18505 474 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FMO3P31513 532 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 SLC16A1P53985 500 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 NFATC3Q12968 1075 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 CDK5R2Q13319 367 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 ITGADQ13349 1161 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 RNPS1Q15287 305 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 PLBD1Q6P4A8 553 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 CREB3L2Q70SY1 520 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 CPOQ8IVL8 374 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF786Q8N393 782 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FAM57AQ8TBR7 257 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FBLIM1Q8WUP2 373 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 LRR1Q96L50 414 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF385AQ96PM9 386 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 EMC6Q9BV81 110 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FN3KQ9H479 309 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 HINT3Q9NQE9 182 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 EMC3Q9P0I2 261 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 CLCF1Q9UBD9 225 aa13.73□□□□□ -0.21
HERPUD1-219ENST00000570273 FIGNL2A6NMB9 653 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF726A6NNF4 738 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 AHRRA9YTQ3 701 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 WBP4O75554 376 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 TGM6O95932 706 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 RENP00797 406 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 CDKN2AP42771 156 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 TEKQ02763 1124 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 SF3B4Q15427 424 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 20
HERPUD1-219ENST00000570273 TMEM201Q5SNT2 666 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 CARD17Q5XLA6 110 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 NHLRC1Q6VVB1 395 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 ADGRE4PQ86SQ3 457 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 NPEPL1Q8NDH3 523 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 CPT1CQ8TCG5 803 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 ZNF775Q96BV0 537 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 ADAD1Q96M93 576 aaKnown RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 Q96MT0 163 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 BBC3Q96PG8 261 aaPredicted RBP13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 MED20Q9H944 212 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 CLEC4AQ9UMR7 237 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 FLVCR1Q9Y5Y0 555 aa13.72□□□□□ -0.21
HERPUD1-219ENST00000570273 CFAP46Q8IYW2 2715 aa13.71□□□□□ -0.21
HERPUD1-219ENST00000570273 IGKV3D-15A0A087WSY6 115 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 PRSS37A4D1T9 235 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 SLC35F4A4IF30 521 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 KDM4EB2RXH2 506 aaPredicted RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 M0R3G1 203 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 GPR171O14626 319 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 WDR1O75083 606 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 ENTPD6O75354 484 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 TRMUO75648 421 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 IGHG1P01857 330 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 EDN3P14138 238 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 GABRA1P14867 456 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 NUDT6P53370 316 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 EFNB1P98172 346 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 RBPJQ06330 500 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 RUNX1T1Q06455 604 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 OCLNQ16625 522 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 C6orf141Q5SZD1 244 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 ZNF362Q5T0B9 420 aaPredicted RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 C1orf185Q5T7R7 199 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 MEDAGQ5VYS4 303 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 GTF2IRD2BQ6EKJ0 949 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 GTF2IRD2Q86UP8 949 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 GID4Q8IVV7 300 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 ZIC4Q8N9L1 334 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 NOXO1Q8NFA2 376 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 BBS1Q8NFJ9 593 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 OR9Q1Q8NGQ5 310 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 OR6X1Q8NH79 312 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 HDAC2Q92769 488 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 ZNF582Q96NG8 517 aaPredicted RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 SNX18Q96RF0 628 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 RPRD1BQ9NQG5 326 aaKnown RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 ING1Q9UK53 422 aaPredicted RBP13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 RCE1Q9Y256 329 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 KIAA1549Q9HCM3 1950 aa13.71□□□□□ -0.22
HERPUD1-219ENST00000570273 OR6C68A6NDL8 312 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 PRRG2O14669 202 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 FAM20BO75063 409 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 SMNDC1O75940 238 aaKnown RBP eCLIP13.7□□□□□ -0.227e-11■■■□□ 15.1
HERPUD1-219ENST00000570273 PTGER4P35408 488 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 CHN2P52757 468 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 CLRN1P58418 232 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 CAMK2DQ13557 499 aa13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 SMN1Q16637 294 aaKnown RBP13.7□□□□□ -0.22
HERPUD1-219ENST00000570273 KLHL12Q53G59 568 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms