RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	ATRX	P46100	2492 aa		14.02	□□□□□ -0.17
CMC2-222	ENST00000570086	ALPK2	Q86TB3	2170 aa		14.02	□□□□□ -0.17
CMC2-222	ENST00000570086		M0R3G1	203 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	PRKY	O43930	277 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	HIST1H1C	P16403	213 aa	Known RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	GABRB1	P18505	474 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	PAICS	P22234	425 aa	Known RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	ACVR2A	P27037	513 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	BID	P55957	195 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	MAD2L1BP	Q15013	274 aa	Predicted RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	MEST	Q5EB52	335 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNF362	Q5T0B9	420 aa	Predicted RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	C1orf185	Q5T7R7	199 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	EEF1A1P5	Q5VTE0	462 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	KRT80	Q6KB66	452 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	JAZF1	Q86VZ6	243 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	FAM26E	Q8N5C1	309 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	TCEANC	Q8N8B7	351 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	ZIC4	Q8N9L1	334 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	OR52E2	Q8NGJ4	325 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	OR4K13	Q8NH42	304 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	FBLIM1	Q8WUP2	373 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	CNBD2	Q96M20	576 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	TM9SF2	Q99805	663 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	TP63	Q9H3D4	680 aa	Predicted RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	MED29	Q9NX70	200 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNF226	Q9NYT6	803 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	ING1	Q9UK53	422 aa	Predicted RBP	14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	LRCH1	Q9Y2L9	728 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	COL6A6	A6NMZ7	2263 aa		14.01	□□□□□ -0.17
CMC2-222	ENST00000570086	BOD1L1	Q8NFC6	3051 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	MBD3L4	A6NDZ8	208 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	MBD3L3	A6NE82	208 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	MBD3L5	A6NJ08	208 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNF726	A6NNF4	738 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNHIT1	O43257	154 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC19A2	O60779	497 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC2A10	O95528	541 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	TGM6	O95932	706 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	NR2C1	P13056	603 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	MLLT10	P55197	1068 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	CLDN17	P56750	224 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	ITGAD	Q13349	1161 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	MELK	Q14680	651 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	TMEM201	Q5SNT2	666 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	MEDAG	Q5VYS4	303 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	OR2A2	Q6IF42	318 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC37A3	Q8NCC5	494 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	NPEPL1	Q8NDH3	523 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	FNDC8	Q8TC99	324 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC25A44	Q96H78	314 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	GMPPA	Q96IJ6	420 aa	Predicted RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	TXNDC15	Q96J42	360 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086		Q96MT0	163 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	ZFP3	Q96NJ6	502 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNF385A	Q96PM9	386 aa	Known RBP	14	□□□□□ -0.17
CMC2-222	ENST00000570086	IL4I1	Q96RQ9	567 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	KCNK17	Q96T54	332 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	DDO	Q99489	341 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	ALG12	Q9BV10	488 aa		14	□□□□□ -0.17
CMC2-222	ENST00000570086	PRSS37	A4D1T9	235 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC35F4	A4IF30	521 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	PRR23D1	E9PI22	279 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	ARHGEF9	O43307	516 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	TLX2	O43763	284 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	TRMU	O75648	421 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	REN	P00797	406 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	IGHG1	P01857	330 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	YES1	P07947	543 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	CDKN2A	P42771	156 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	SLC25A1	P53007	311 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	CD47	Q08722	323 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	CRMP1	Q14194	572 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	OCLN	Q16625	522 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	LEG1	Q6P5S2	330 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	CXXC5	Q7LFL8	322 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	SDR9C7	Q8NEX9	313 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	UBE2F	Q969M7	185 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	INTS12	Q96CB8	462 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	NMNAT3	Q96T66	252 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	MRPL13	Q9BYD1	178 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	HINT3	Q9NQE9	182 aa	Known RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	RASSF1	Q9NS23	344 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	PARPBP	Q9NWS1	579 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	CLN6	Q9NWW5	311 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	VSX1	Q9NZR4	365 aa	Predicted RBP	13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	BSN	Q9UPA5	3926 aa		13.99	□□□□□ -0.17
CMC2-222	ENST00000570086	SH3D21	A4FU49	640 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	KDM4E	B2RXH2	506 aa	Predicted RBP	13.98	□□□□□ -0.17
CMC2-222	ENST00000570086		M0R129	80 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	SS18L1	O75177	396 aa	Predicted RBP	13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	ZNF432	O94892	652 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	CRH	P06850	196 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	PGA4	P0DJD7	388 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	PGA3	P0DJD8	388 aa		13.98	□□□□□ -0.17
CMC2-222	ENST00000570086	CDK5R2	Q13319	367 aa		13.98	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms