RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 SELPLGQ14242 412 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 CARTPTQ16568 116 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 PHYHD1Q5SRE7 291 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 ZNF813Q6ZN06 617 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 OR10A6Q8NH74 314 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 MPP4Q96JB8 637 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 SEC61A2Q9H9S3 476 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 TMEM160Q9NX00 188 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 SPEF1Q9Y4P9 236 aa19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 CHD3Q12873 2000 aaKnown RBP19.54■□□□□ 0.72
RBFOX1-219ENST00000569895 TRAPPC13A5PLN9 417 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 ENTPD5O75356 428 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 SERPINI2O75830 405 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 HIST1H2ABP04908 130 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 THBS4P35443 961 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 NR4A2P43354 598 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 GZMKP49863 264 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 DAG1Q14118 895 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 GSG1Q2KHT4 349 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 HIST3H2AQ7L7L0 130 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 ZNF627Q7L945 461 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 CXXC5Q7LFL8 322 aaKnown RBP19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 GPR32P1Q8NGA4 272 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 ADAMTS16Q8TE57 1224 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 HIST1H2ACQ93077 130 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 NANSQ9NR45 359 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 B3GNT2Q9NY97 397 aa19.53■□□□□ 0.72
RBFOX1-219ENST00000569895 VWC2LB2RUY7 222 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 LRRN3E7EW58 273 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 C11orf98E9PRG8 122 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 hCG_2039718K7EN88 272 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 SEC14L2O76054 403 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 CD247P20963 164 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 CSNK1A1P48729 337 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 GGTLC2Q14390 218 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 IQCCQ4KMZ1 466 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 NHLRC1Q6VVB1 395 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 SPATA21Q7Z572 469 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 ANKS4BQ8N8V4 417 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 SPATA3Q8NHX4 192 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 VANGL1Q8TAA9 524 aaPredicted RBP19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 NEU4Q8WWR8 484 aaPredicted RBP19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 FOXB1Q99853 325 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 BEX2Q9BXY8 128 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 SLC19A3Q9BZV2 496 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 LPAR3Q9UBY5 353 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 FBXL3Q9UKT7 428 aa19.52■□□□□ 0.72
RBFOX1-219ENST00000569895 CH25HO95992 272 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 HLA-HP01893 362 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 IGHV4-31P0DP07 118 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 IFNGR1P15260 489 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 BIDP55957 195 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 ZP4Q12836 540 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 NPTX1Q15818 432 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 ZNF74Q16587 644 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 VMACQ2NL98 169 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 TRMT5Q32P41 509 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 OR6X1Q8NH79 312 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 FOXN4Q96NZ1 517 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 DOK1Q99704 481 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 SLC7A7Q9UM01 511 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 CMAHPQ9Y471 501 aa19.51■□□□□ 0.71
RBFOX1-219ENST00000569895 ZNF503-AS2A6NEH8 195 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 RNF13O43567 381 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 UBL3O95164 117 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 RAB36O95755 333 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 FAM157CP0CG43 387 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 NR4A1P22736 598 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 PIGFQ07326 219 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 SNTB2Q13425 540 aaKnown RBP19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 MMEL1Q495T6 779 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 NANOGP8Q6NSW7 305 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 SLC35D2Q76EJ3 337 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 CCDC80Q76M96 950 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 PIWIL3Q7Z3Z3 882 aaKnown RBP19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 MYPOPQ86VE0 399 aaPredicted RBP19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 SVOPLQ8N434 492 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 TAMM41Q96BW9 452 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 ECSITQ9BQ95 431 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 PCDHAC1Q9H158 963 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 NANOGQ9H9S0 305 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 NOX3Q9HBY0 568 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 DYNLRB1Q9NP97 96 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 ZNF229Q9UJW7 825 aa19.5■□□□□ 0.71
RBFOX1-219ENST00000569895 LMX1BO60663 402 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 NPPAP01160 153 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 TROVE2P10155 538 aaKnown RBP eCLIP19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 APEHP13798 732 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 B4GALT1P15291 398 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 H2AFXP16104 143 aaPredicted RBP19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 LSP1P33241 339 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 PTDSS1P48651 473 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 RAB1AP62820 205 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 KRT80Q6KB66 452 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 RBM45Q8IUH3 476 aaKnown RBP19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 ZNF566Q969W8 418 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 TMEM120AQ9BXJ8 343 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 SHARPINQ9H0F6 387 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 TAS2R5Q9NYW4 299 aa19.49■□□□□ 0.71
RBFOX1-219ENST00000569895 GLTPQ9NZD2 209 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms