RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HSD17B3P37058 310 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 FRKP42685 505 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 CRYBB2P43320 205 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 RAD52P43351 418 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 MAGEB1P43366 347 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 SERPINB8P50452 374 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 LOXL3P58215 753 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 RPS23P62266 143 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 LCN2P80188 198 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 NPRL3Q12980 569 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 LASP1Q14847 261 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 FAM189A2Q15884 450 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 C2orf68Q2NKX9 166 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 SPDYAQ5MJ70 313 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 PDZK1Q5T2W1 519 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 PAQR6Q6TCH4 344 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 LINGO2Q7L985 606 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 GRINAQ7Z429 371 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 LRP11Q86VZ4 500 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 CMTM4Q8IZR5 234 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 GLB1L3Q8NCI6 653 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 OR9K2Q8NGE7 335 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 IFT81Q8WYA0 676 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 GTF3AQ92664 365 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 CIDECQ96AQ7 238 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 FAM120BQ96EK7 910 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 TIMD4Q96H15 378 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 RAX2Q96IS3 184 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 ALKBH3Q96Q83 286 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 ZNF382Q96SR6 550 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 NMUR2Q9GZQ4 415 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 MS4A7Q9GZW8 240 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 VPS11Q9H270 941 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 ZCCHC3Q9NUD5 404 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 C1RLQ9NZP8 487 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 MYEF2Q9P2K5 600 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 LEF1Q9UJU2 399 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 PURGQ9UJV8 347 aaKnown RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 PCDHGB4Q9UN71 923 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 POLR3HQ9Y535 204 aaPredicted RBP4.97□□□□□ -1.61
CDH13-212ENST00000569144 AUP1Q9Y679 476 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 DSPPQ9NZW4 1301 aa4.97□□□□□ -1.61
CDH13-212ENST00000569144 IGHV1-69-2A0A0G2JMI3 117 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 SRRM5B3KS81 715 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 RPL36A-HNRNPH2H7BZ11 118 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ZNF208O43345 1280 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 HOXA3O43365 443 aaPredicted RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 SHOX2O60902 331 aaPredicted RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 ERLIN1O75477 346 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 RSL1D1O76021 490 aaKnown RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 GPANK1O95872 356 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 CSTAP01040 98 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ENO1P06733 434 aaKnown RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 KRT16P08779 473 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ABHD2P08910 425 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 UBTFL6P0CB48 400 aaPredicted RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 BCKDHAP12694 445 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ZNF12P17014 697 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 PHBP35232 272 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 MAGEA12P43365 314 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ZNF154Q13106 437 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ZNF141Q15928 474 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 PCGF3Q3KNV8 242 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 FAM153CQ494X1 144 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ATP6AP1LQ52LC2 224 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 FAM205BPQ63HN1 556 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ANKRD26P1Q6NSI1 321 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 NOXRED1Q6NXP6 359 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 GPRIN3Q6ZVF9 776 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 MDP1Q86V88 176 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 CCDC36Q8IYA8 594 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ZNF563Q8TA94 476 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ST7LQ8TDW4 575 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ADAMTS15Q8TE58 950 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 DCAKDQ8WVC6 231 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 PMM1Q92871 262 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 RAB1CQ92928 201 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 DDIT4LQ96D03 193 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 EGLN2Q96KS0 407 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 GAL3ST1Q99999 423 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 MRPL57Q9BQC6 102 aaKnown RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 SLC30A2Q9BRI3 323 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 MRI1Q9BV20 369 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 ACTRT3Q9BYD9 372 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 TXLNGYQ9BZA5 131 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 LINC00470Q9BZP3 86 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 TCF7L1Q9HCS4 588 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 SIRT3Q9NTG7 399 aaPredicted RBP4.96□□□□□ -1.62
CDH13-212ENST00000569144 NKIRAS2Q9NYR9 191 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 STK38LQ9Y2H1 464 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 NOX1Q9Y5S8 564 aa4.96□□□□□ -1.62
CDH13-212ENST00000569144 A0A087WUV0 522 aaPredicted RBP4.95□□□□□ -1.62
CDH13-212ENST00000569144 A0A1W2PPW3 197 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 TMEM72A0PK05 275 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 AGAP5A6NIR3 686 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 AQP7P3A6NL99 342 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 C17orf100A8MU93 164 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 NPIPB8E9PQR5 432 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 TMEM127O75204 238 aa4.95□□□□□ -1.62
CDH13-212ENST00000569144 UPK3AO75631 287 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms