RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CCDC168Q8NDH2 2452 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 DHRS12A0PJE2 317 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 EFCAB9A8MZ26 197 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 CLOCKO15516 846 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 RNF13O43567 381 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 AKAP8O43823 692 aaKnown RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 SLC43A1O75387 559 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 KRT36O76013 467 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 HIST1H2ABP04908 130 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 PGA4P0DJD7 388 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 IL32P24001 234 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 DNAJA1P31689 397 aaKnown RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 SMIM11AP58511 58 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 CBX1P83916 185 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 SPIBQ01892 262 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 CHRNB3Q05901 458 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 RUNX1T1Q06455 604 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 FLOT2Q14254 428 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 HIST3H3Q16695 136 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 FAM98BQ52LJ0 330 aaKnown RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 C1QTNF12Q5T7M4 302 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 OR7E24Q6IFN5 339 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 HIST3H2AQ7L7L0 130 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 UBE2J2Q8N2K1 259 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 OR13C2Q8NGS9 318 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 OR52J3Q8NH60 311 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 MAGEE2Q8TD90 523 aaPredicted RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 ASB10Q8WXI3 467 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 HSD17B8Q92506 261 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 HIST1H2ACQ93077 130 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 SLCO4A1Q96BD0 722 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 SLC25A44Q96H78 314 aaPredicted RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 FAM46AQ96IP4 442 aaKnown RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 ADAD1Q96M93 576 aaKnown RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 ALPK1Q96QP1 1244 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 TMEM204Q9BSN7 226 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 TRIM15Q9C019 465 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 GPR35Q9HC97 309 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 INIPQ9NRY2 104 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 ZNF226Q9NYT6 803 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.89□□□□□ -0.67
RNF40-211ENST00000567365 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
RNF40-211ENST00000567365 TRAV27A0A087WT01 109 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 CENPBD1B2RD01 187 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 ZNF587BE7ETH6 402 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 RAD51DO75771 328 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 F13BP05160 661 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 SAGP10523 405 aaPredicted RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 GSSP48637 474 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 SH3BGRP55822 239 aaPredicted RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 BIDP55957 195 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 CAMK2DQ13557 499 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 STK11Q15831 433 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 ACKR1Q16570 336 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 ALG10Q5BKT4 473 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 OR2T5Q6IEZ7 315 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 C1orf94Q6P1W5 598 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 SSX8Q7RTT4 187 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 FAM122BQ7Z309 247 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 OAFQ86UD1 273 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 C17orf78Q8N4C9 275 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 OR1K1Q8NGR3 316 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 OR2T29Q8NH02 315 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 OR51A7Q8NH64 312 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 ZNF519Q8TB69 540 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 BCL2L2Q92843 193 aaPredicted RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 ZC3HAV1LQ96H79 300 aaKnown RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 LURAP1Q96LR2 239 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 LRGUKQ96M69 825 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 GPX7Q96SL4 187 aaPredicted RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 CHID1Q9BWS9 393 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 TXNIPQ9H3M7 391 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 PLEKHF2Q9H8W4 249 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 CCM2LQ9NUG4 571 aaPredicted RBP10.88□□□□□ -0.67
RNF40-211ENST00000567365 NPAP1Q9NZP6 1156 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 VPS13CQ709C8 3753 aa10.88□□□□□ -0.67
RNF40-211ENST00000567365 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 ZNF726A6NNF4 738 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 SERPINI2O75830 405 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 BCL10O95999 233 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 HOXB6P17509 224 aaKnown RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 FPR3P25089 353 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 DAP3P51398 398 aaKnown RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 IL1RL1Q01638 556 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 TGFBR3Q03167 851 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 MELKQ14680 651 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 TAF11Q15544 211 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 CEACAM16Q2WEN9 425 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 ZBED5Q49AG3 693 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 BEX5Q5H9J7 111 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 C9orf135Q5VTT2 229 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 PGBD2Q6P3X8 592 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms