RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 ENTPD8Q5MY95 495 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 PODNL1Q6PEZ8 512 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
COMMD4-216ENST00000567023 MDP1Q86V88 176 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 SNX32Q86XE0 403 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 OR4D11Q8NGI4 311 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 OR5J2Q8NH18 312 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 SPATA3Q8NHX4 192 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 ADAMTS16Q8TE57 1224 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 ZNF75AQ96N20 296 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 DOK1Q99704 481 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 ZNF426Q9BUY5 554 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-216ENST00000567023 MED29Q9NX70 200 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 CDC42EP3Q9UKI2 254 aa12.34□□□□□ -0.43
COMMD4-216ENST00000567023 IGHV2OR16-5A0A0B4J2B6 119 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF726A6NNF4 738 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 LYPD3O95274 346 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 IFNA2P01563 188 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 OPN1SWP03999 348 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 CD247P20963 164 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 PCGF2P35227 344 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 THBS4P35443 961 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 NR4A2P43354 598 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 CRYBA2P53672 197 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 NFYCQ13952 458 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF74Q16587 644 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 INTS11Q5TA45 600 aaKnown RBP12.33□□□□□ -0.44
COMMD4-216ENST00000567023 CARD17Q5XLA6 110 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 CYB5R2Q6BCY4 276 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 WDR88Q6ZMY6 472 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 CCDC80Q76M96 950 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 SLC46A3Q7Z3Q1 461 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 WDFY1Q8IWB7 410 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF540Q8NDQ6 660 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 OR10A6Q8NH74 314 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 MPP4Q96JB8 637 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 VRK1Q99986 396 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-216ENST00000567023 SLC19A3Q9BZV2 496 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 RAB1BQ9H0U4 201 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 B3GAT2Q9NPZ5 323 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 SAR1AQ9NR31 198 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 TAS2R5Q9NYW4 299 aa12.33□□□□□ -0.44
COMMD4-216ENST00000567023 TRAPPC13A5PLN9 417 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 CPSF4LA6NMK7 179 aaKnown RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 FBP2O00757 339 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NPPAP01160 153 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 HLA-HP01893 362 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ADORA3P0DMS8 318 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 IGHV4-31P0DP07 118 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF35P13682 527 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF14P17017 642 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NPR2P20594 1047 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 AHCYP23526 432 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 CAMK2DQ13557 499 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 CYLC2Q14093 348 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 GSG1Q2KHT4 349 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 VMACQ2NL98 169 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NANOGP8Q6NSW7 305 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 TTC33Q6PID6 262 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF813Q6ZN06 617 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 PIWIL3Q7Z3Z3 882 aaKnown RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 TSPYL5Q86VY4 417 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 RBM45Q8IUH3 476 aaKnown RBP12.32□□□□□ -0.44
COMMD4-216ENST00000567023 C10orf53Q8N6V4 93 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ANKS4BQ8N8V4 417 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 OR6X1Q8NH79 312 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 TAMM41Q96BW9 452 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 FOXN4Q96NZ1 517 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 SH3GL1Q99961 368 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 PIMREGQ9BSJ6 248 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ULBP2Q9BZM5 246 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NANOGQ9H9S0 305 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NOX3Q9HBY0 568 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 NANSQ9NR45 359 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF224Q9NZL3 707 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 POFUT2Q9Y2G5 429 aa12.32□□□□□ -0.44
COMMD4-216ENST00000567023 RTTNQ86VV8 2226 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 hCG_2039718K7EN88 272 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 SEC14L2O76054 403 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 OR6A2O95222 327 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 ASAH2BP0C7U1 165 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 IFNGR1P15260 489 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 NR4A1P22736 598 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 GIFP27352 417 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 CAPZA2P47755 286 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 EVX1P49640 407 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 GZMKP49863 264 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 SF3A3Q12874 501 aaKnown RBP eCLIP12.31□□□□□ -0.44
COMMD4-216ENST00000567023 NPRL3Q12980 569 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 DAG1Q14118 895 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
COMMD4-216ENST00000567023 COQ5Q5HYK3 327 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 CALHM3Q86XJ0 350 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 OR6N1Q8NGY5 312 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms